Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0157 ATGGAGTTTCCCTCTTCTTTCCTCTTTCCCTTTCTTCTCTTTCTATTTATCCTATTCAAAGTAAGTAAGAAATCCAAACCCCAAATCTCTATTCCAAAGCGGCCTCCAGGACCATGGAAGCTACCCCTGATTGGAAACTTGCACCAACTTGTTGGTTCACTTCCTCATCACTCACTGAGGGACTTGGCAAAGAAATATGGACCTCTCATGCACCTACAACTTGGCCAAGTCTCCATGCTTGTAGTCTCATCGCCAGAGATTGCCAAAGAGGTTATGAAAACCCATGACATCAACTTTGCCCAAAGGCCCCATCTTCTTGCTACCAGGATCGTATCTTATGATTCTACTGACGTCGCTTTTTCTCCATATGGTGATTACTGGAGGCAACTCCGGAAAATCTGTGTGGTCGAACTTCTCAGTGCCAAGCGTGTTAAATCATTCCAGGTGATTAGGAAGGAGGAGGTTTCAAAACTCATCAGAATCATCAACTCTAGTTCAAGATTTCCAATCAATCTGAGGGACAGAATTTCGGCTTTTACTTATTCGGCAATCTCAAGAGCGGCACTGGGGAAAGAATGCAAAGACCATGACCCATTGACAGCGGCTTTTGGGGAAAGCACAAAGCTGGCATCAGGTTTCTGTCTTGCCGATTTGTACCCTTCTGTTAAATGGATTCCCCTGGTCAGCGGAGTGAGGCATAAACTTGAGAAGGTGCAGCAGAGGATTGATGGAATACTTCAGATTGTTGTCGATGAGCACAGAGAGAGAATGAAAACAACAACAGGCAAGCTAGAAGAAGAGAAAGACTTGGTTGATGTGCTTTTAAAGCTTCAACAGGATGGTGACCTTGAACTTCCCTTAACCGACGACAATATTAAAGCAGTCATCTTGGACATTTTCGGTGGGGGAGGGGATACAGTATCGACAGCAGTGGAGTGGACAATGGCGGAAATGATGAAAAACCCTGAAGTCATGAAGAAGGCACAAGCTGAGGTAAGGCGGGTCTTTGATGGAAAAGGGAATGTGGATGAAGCGGGTATTGATGAATTGAAATTCTTAAAAGCGGTAATCTCTGAAACCTTGAGGCTACACCCTCCTTTCCCATTGTTGCTTCCAAGGGAATGTAGGGAGAAGTGTAAGATTAATGGATATGAGGTACCTGTGAAGACCAGAGTGGTCATTAATGCATGGGCAATTGGACGGTACCCCGATTGTTGGAGTGAAGCTGAGAGATTTTACCCAGAGAGATTCCTTGATAGTTCAATTGATTACAAGGGTGCTGATTTTGGGTTTATTCCGTTTGGTAGTGGAAGGAGGATATGTCCAGGCATACTGTTTGGCATACCTGTGATTGAGCTGCCACTAGCCCAGTTGCTGTTCCATTTTGACTGGAAACTTCCCAATGGAATGAGGCCTGAGGATCTAGACATGACTGAGGTTCATGGGTTAGCAGTTAGAAAAAAACATAATCTGCACTTAATTCCCATTCCTTATAGTCCATTGACTGTTGGGTGA 1515 0.4449 MEFPSSFLFPFLLFLFILFKVSKKSKPQISIPKRPPGPWKLPLIGNLHQLVGSLPHHSLRDLAKKYGPLMHLQLGQVSMLVVSSPEIAKEVMKTHDINFAQRPHLLATRIVSYDSTDVAFSPYGDYWRQLRKICVVELLSAKRVKSFQVIRKEEVSKLIRIINSSSRFPINLRDRISAFTYSAISRAALGKECKDHDPLTAAFGESTKLASGFCLADLYPSVKWIPLVSGVRHKLEKVQQRIDGILQIVVDEHRERMKTTTGKLEEEKDLVDVLLKLQQDGDLELPLTDDNIKAVILDIFGGGGDTVSTAVEWTMAEMMKNPEVMKKAQAEVRRVFDGKGNVDEAGIDELKFLKAVISETLRLHPPFPLLLPRECREKCKINGYEVPVKTRVVINAWAIGRYPDCWSEAERFYPERFLDSSIDYKGADFGFIPFGSGRRICPGILFGIPVIELPLAQLLFHFDWKLPNGMRPEDLDMTEVHGLAVRKKHNLHLIPIPYSPLTVG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0157 504 Coils Coil 250 270 - -
Vvi8g0157 504 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 CDD CYP71-like 65 491 - -
Vvi8g0157 504 FunFam Cytochrome P450 71D8 27 495 - -
Vvi8g0157 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vvi8g0157 504 Gene3D Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0157 504 PANTHER OS08G0105600 PROTEIN 57 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0157 Vvi-Chr8 3263145 3264737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0157 7 495 Cytochrome P450 AT3G26310 42.685 1.15e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0157 - - vvi:100251316 946.806