Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0143 ATGAAATCAACCCATCTTCAAGCCCTAACACCACCGTCTACCGCCATTAACGCCTCTGTTCAGCATCAACGTTTTGATGATTACAGGTGTGTTCTCCTTGGGGTGAGCTATGGTGAAAATATTGCAGACTATGTGGCTCGGAGGTTTGTAGAGGCAGGCAAGCTTTTAGACCCTGTTAAGGTGGTGGCCCAAATTCTGATGTACCCTTGTTTCATTGGAAGTGTCCCCACAAAATCAGAGATTAAACTAGCTAACTCTTACTTCTATGACAAAGCTATGTGCTTGCTTGCATGGAAACTCTTCCTACCTGAGGAAGAAGTGAACCTAAACCACCCAACTACCAACCCTCTAATTCTTGGGAGGGGACCACCCTTGAAGTGCATACCGAGCCATTGCTTATTCAAAGGAGCTCCGGAAACCCAAGCCTGTGCTGAGGACATTGCCATGTGGGTCAAGAAGTATATTTCAGTCAGAGGCCATGAGTTTTTCTTATTGACTATGCTGACAAAAAGGGGAATAAGAGTATTCGTAGAAGGAAAGGAATATGCAATTTTTTTTTATGATGGTGCAATTATTATGATCTGTGCAAACGTTCATTTATTCTTTTATTCATGTTCTTTATGTCCATGTTGA 633 0.425 MKSTHLQALTPPSTAINASVQHQRFDDYRCVLLGVSYGENIADYVARRFVEAGKLLDPVKVVAQILMYPCFIGSVPTKSEIKLANSYFYDKAMCLLAWKLFLPEEEVNLNHPTTNPLILGRGPPLKCIPSHCLFKGAPETQACAEDIAMWVKKYISVRGHEFFLLTMLTKRGIRVFVEGKEYAIFFYDGAIIMICANVHLFFYSCSLCPC* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0143 210 PANTHER ARYLACETAMIDE DEACETYLASE 26 137 - -
Vvi8g0143 210 Gene3D alpha/beta hydrolase 13 161 IPR029058 -
Vvi8g0143 210 Pfam alpha/beta hydrolase fold 21 119 IPR013094 GO:0016787
Vvi8g0143 210 SUPERFAMILY alpha/beta-Hydrolases 24 119 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0143 Vvi-Chr8 2906244 2912260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0143 26 162 Carbohydrate Esterase AT3G27320 55.000 3.43e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0143 - - vvi:100251099 213.386