Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0054 ATGAACGATGCAGATGTCTCCAGGCAGATACAGCAGATGGTCAGATTCATTCTGCAGGAGGCCGAAGAGAAAGCTAACGAAATCTCTGTTTCTGCTGAAGAGGAATTCAACATTGAGAAATTGCAACTAGTTGAAGCTGAAAAGAAGAAGATTAGACAAGAATATGAGCGGAAGGCAAAGCAGGTGGAAATTCGAAGGAAAATTGAGTACTCGATGCAGCTGAATGCATCCCGCATCAAGGTTCTTCAAGCGCAAGATGATCTGGTGAACTCCATGAAAGAAGCCACTGGCAAGGAACTTTTGCGTGTTTCTGATGACACAAATGGATACAAAATGCTTCTTAAAGGTTTGATTGTTCAGAGTTTACTACGACTGAAGGAGCCAGCAGTGTTGCTGCGCTGCAGAGAGATTGACCTTGGGCCAGTTGAGTCTGTTTTGGGGGAAGCAAAACAAGAGTATGCTGACAAAGCCAAAGTTCATGTCCCCAAAGTTACCATTGACAACCTTGTATACCTCCCACCACCTCCCAGTAGTGTTGATTCCCACAGCCTCTTCTGCTCAGGAGGAGTGGTTTTGGCTTCACAGGACGGGAAGATAGTCTGTGAGAACACTCTGGATGCACGATTGGATGTTGTATTCCGACAGAAACTGCCTGAGATCAGAAAGCTTCTTTTTGGACAAGTTGTTGCTTGA 693 0.4517 MNDADVSRQIQQMVRFILQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAKQVEIRRKIEYSMQLNASRIKVLQAQDDLVNSMKEATGKELLRVSDDTNGYKMLLKGLIVQSLLRLKEPAVLLRCREIDLGPVESVLGEAKQEYADKAKVHVPKVTIDNLVYLPPPPSSVDSHSLFCSGGVVLASQDGKIVCENTLDARLDVVFRQKLPEIRKLLFGQVVA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0054 230 Gene3D - 1 62 - -
Vvi8g0054 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g0054 230 Coils Coil 38 65 - -
Vvi8g0054 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g0054 230 Gene3D - 92 228 IPR038495 -
Vvi8g0054 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g0054 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0054 Vvi-Chr8 896599 901842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0054 1 230 Primary Pumps ATPases(2) AT4G11150 77.391 1.48e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0054 K02150 - vvi:100248521 441.425