Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1554 ATGACTCAATCCTCACCTGTTCTTCCATGGAAAACCAAGTTCGTCCTTTCCGTGCTTTCTGCCGTTACCGATTTTGCCCGCCGTGATGACGGCACCATCAACCGCCGTCTCCTCAGCTTCCTCAACTTCCGCGCTCCGCCCAACTCTACTCCCGTTAACGGAGTTAAGACCTCCGACGTGACTGTCGATCCCTCACGAAACCTCTGGTTTCGCCTCTTCGAGCCTACGGAGGTTCCTGGCCGAGGTGAGAAGCTTCCGGTGATTGTGTTCTTCCACGGCGGCGGCTTCGCCTTCATGAGCGCCGATTCCAAGGCCTACGACGCCGTGTGCCGCCGATTCGCCCGGAAAATCCCTGCCATCGTGGCCTCCGTCAATTACCGGCTCTCGCCGGAGCACCGGTGCCCGGCACAGTACGACGACGGCTTCGATGTCCTCAAGTACCTGGATTCTCAACCCCCGGCCAACTCCGATCTGTCAATGTGCTTCCTCGTCGGGGACAGCGCGGGGGCGAACCTCGCGCACAACTTGACAGTGCGGGCGTGCGAAACAACGACGTTTCGGGAGGTGAAGGTGGTGGGACTGGTTCCCATTCAGCCCTTCTTTGGGGGAGAGGAGAGGACGGAGTCGGAGAGGAGGCTGGAAGGTTCGCCGCTGGTGTCAATGAGGCGTACGGACTGCATGTGGAAGATGTTTTCGCCGGAAGGAGCCGACAGAGACCACGAGGCGGCGAATGTGAGCGGGCCAAGAGGGAGGGAGTTGTCGGAGGTGGAGTTTCCGGCGACGATGGTATTCATTGGAGGATTCGATCCGTTGCAGGACTGGCAGAGGAGGTACTGCGAGTGGCTGAAGAGATCGGGGAAGGAAGTGAGGGTGTTGGAGTATGGGAGTGCGATTCATGCATTTTACATCTTTCCGGAACTGCCGGAGGCGTCTCTCTTGTTTGCAGAGGTGAAGAATTTCGTTGAGAAACAGAAGAAAACGCATAGGCAATACCCATCCATGATCTAG 1008 0.5784 MTQSSPVLPWKTKFVLSVLSAVTDFARRDDGTINRRLLSFLNFRAPPNSTPVNGVKTSDVTVDPSRNLWFRLFEPTEVPGRGEKLPVIVFFHGGGFAFMSADSKAYDAVCRRFARKIPAIVASVNYRLSPEHRCPAQYDDGFDVLKYLDSQPPANSDLSMCFLVGDSAGANLAHNLTVRACETTTFREVKVVGLVPIQPFFGGEERTESERRLEGSPLVSMRRTDCMWKMFSPEGADRDHEAANVSGPRGRELSEVEFPATMVFIGGFDPLQDWQRRYCEWLKRSGKEVRVLEYGSAIHAFYIFPELPEASLLFAEVKNFVEKQKKTHRQYPSMI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1554 335 Pfam alpha/beta hydrolase fold 88 302 IPR013094 GO:0016787
Vvi7g1554 335 FunFam Probable carboxylesterase 18 1 329 - -
Vvi7g1554 335 SUPERFAMILY alpha/beta-Hydrolases 37 323 IPR029058 -
Vvi7g1554 335 Gene3D alpha/beta hydrolase 1 332 IPR029058 -
Vvi7g1554 335 PANTHER ARYLACETAMIDE DEACETYLASE 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1554 Vvi-Chr7 20631298 20632305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1554 1 324 Carbohydrate Esterase AT3G05120 38.529 1.99e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1554 - - vvi:100249517 686.797