Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1552 ATGACTCAATCCTCACCTGTTCTTCCATGGAAAACCAAGATCGCCCTTTCCGCGATTTCTGCCGTTACCGACTTTTCCCTCCGTGATGACGGCACTATCAACCGCCGTCTCCTCAGCTTCCTCGACTTCCGCGCTCCGCCCAACTCTACCCCCGTTCACGGAGTTAAGACCTCCGACGTGACTGTCGATCCCTCACGAAACCTCTGGTTTCGCCTCTTCGAGCCTACGGAGGTTCCTGGCCGAGGTGAGAAGCTTCCGGTGATTGTGTTCTTCCACGGCGGCGGCTTCGCCTACCTGAGCGCCTATTCCAAGGCCTACGACGCCGTGTGCCGCCGATTCGCCCGGAAAATCCCTGCCATCGTGGCCTCCGTCAATTACCGGCTCTCGCCGGAGCACCGGTGCCCTGCACAGTACGACGACGGCTTCGATGTCCTCAAGTACCTGGATTCTCAACCCCCGGCCAACTCCGATCTGTCAATGTGCTTCCTCGTCGGGGACAGCGCGGGGGCGAACCTCGCGCACAACGTGACGGTGCGGGCGTGCGAAACAACGACGTTTCGGGAGGTGAAGGTGGTGGGACTGGTTCCCATTCAGCCCTTCTTTGGGGGAGAGGAGAGGACGGAGTCGGAGAGGAGGCTGGAAGGTTCGCCGCTGGTGTCAATGAGGCGTACGGACTGCATGTGGAAGATGTTTTTGCCGGAAGGAGCCAACAGAGACCACGAGGCGGCGAATGTGAGCGGGCCAAGAGGGAGGGAGTTGTCGGAGGTGGAGTTTCCGGCGACGATGGTATTCATTGGAGGATTCGATCCGTTGCAGGACTGGCAGAGGAGGTACTGCGAGTGGCTGAAGAGATCGGGGAAGGACGTGAGGGTGTTGGAGTATGGGAGTGCGATTCATGCGTTTTACGTGTTTCCGGAACTGCCGGAGGCGTCTCTCTTGTTTGCAGAGGTGAAGAATTTCGTTGAGAAACAGAAGAAAACGCGTAGGCAAAACCCATCCATGATCTAG 1008 0.5833 MTQSSPVLPWKTKIALSAISAVTDFSLRDDGTINRRLLSFLDFRAPPNSTPVHGVKTSDVTVDPSRNLWFRLFEPTEVPGRGEKLPVIVFFHGGGFAYLSAYSKAYDAVCRRFARKIPAIVASVNYRLSPEHRCPAQYDDGFDVLKYLDSQPPANSDLSMCFLVGDSAGANLAHNVTVRACETTTFREVKVVGLVPIQPFFGGEERTESERRLEGSPLVSMRRTDCMWKMFLPEGANRDHEAANVSGPRGRELSEVEFPATMVFIGGFDPLQDWQRRYCEWLKRSGKDVRVLEYGSAIHAFYVFPELPEASLLFAEVKNFVEKQKKTRRQNPSMI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1552 335 FunFam Probable carboxylesterase 18 1 329 - -
Vvi7g1552 335 Pfam alpha/beta hydrolase fold 88 302 IPR013094 GO:0016787
Vvi7g1552 335 SUPERFAMILY alpha/beta-Hydrolases 38 323 IPR029058 -
Vvi7g1552 335 Gene3D alpha/beta hydrolase 1 333 IPR029058 -
Vvi7g1552 335 PANTHER ARYLACETAMIDE DEACETYLASE 28 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1552 Vvi-Chr7 20615470 20616477 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1552 1 324 Carbohydrate Esterase AT3G05120 38.529 1.65e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1552 - - vvi:100244363 685.641