Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1547 ATGAGATTAGCTTGGGCCATGCCTCTCCCTGGGCTCCCTATCTTCATCTCTTGCCGAATTCGGAGTCGTTGCCGTTGGTCTGGAGCCTCGATGAGGTTGATTCACTTCTTTCTGGTACTGAGATCCACAAGGCAGATAGTGAAAGAAGATAAGGCACTTATTTATGATGACTGGAAAGAGAACATTCTACCCCTTATGGATTCAACATCTTTAAAGCTCAGTCCAGACTTCTTTGGTGTTGAACAGTACATTGCTGCAAAAAGCCTTGTTGCATCTCGATCTTTTGAGGTAGATGATTACCATGGGTTTGGGATGGTTCCTTTGGCTGATCTCTTTAATCACAAGACGGGAGCTGAGAATGTACACTTCACCACTGAATTGTCTCATGGTGACTCCGATAATGATACAGACAACAATGATGAGGGCAACAATATGAGTGATAATAAACCACTTCCTCAAAATTCTTTCGATGATGGTAACTTGGAAGACCCTTCATATTTGGGGAATGATTCGATGATTTTGGAAACAATTATTGTGAAAAGTGTCAAAGCCGGGGATGAGGTATTTAATACATATGGGTCTATGGGTAATGCTGGATTGCTACACAGATATGGATTTACAGAGCCTGATAATCCGAATGATATAGTGAATATTGATCTTGAACTGGTACTTCATTGGAGTTCAGCTTTGTTCTCTGGTCGGCATAGTAGAGGAAGGCTTTCATTGTGGAGGAGGTTGGATTACCATGGATGTGTGAGCCAGAATTCTGAATATTTTGAAATCTCATCTAATGGGGAACCCGAAATTGAGCTGCTGATTTTGCTTTACATAATGTTACTGCCAGAGGAAGCATATAATAAGCTGGATCTTATAGTATCTACTGCAGGAAATTTGAATGAAATGGTGATTTCATTGGAAAGGGGCATGATTCCTTTTGGAAAAACTTCAGAAATAAGCAAGGAATTGTTGCTGACCAAAAGTGTGTGTGATGCCCTGTTGGCACTTGCAGATGCTCGGGAGAGCTTATATGGTTCAAATTCTGTAGATGATATTGATGCATTGAGGAGTTGTTGCATAAGTGATCAGAAGTTATACCATTCTCTGATGTTGCGTGTGAGTGAGAGGATGATCCTCAAGAAGCTGAGGACTTATGCTGCTACTGCTGCTGCTCGATCACACCCAACTGCAAAGGGAACTCTTTCAAGGAAGAAGTTGAAGAGAACATGA 1227 0.4148 MRLAWAMPLPGLPIFISCRIRSRCRWSGASMRLIHFFLVLRSTRQIVKEDKALIYDDWKENILPLMDSTSLKLSPDFFGVEQYIAAKSLVASRSFEVDDYHGFGMVPLADLFNHKTGAENVHFTTELSHGDSDNDTDNNDEGNNMSDNKPLPQNSFDDGNLEDPSYLGNDSMILETIIVKSVKAGDEVFNTYGSMGNAGLLHRYGFTEPDNPNDIVNIDLELVLHWSSALFSGRHSRGRLSLWRRLDYHGCVSQNSEYFEISSNGEPEIELLILLYIMLLPEEAYNKLDLIVSTAGNLNEMVISLERGMIPFGKTSEISKELLLTKSVCDALLALADARESLYGSNSVDDIDALRSCCISDQKLYHSLMLRVSERMILKKLRTYAATAAARSHPTAKGTLSRKKLKRT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1547 408 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi7g1547 408 Gene3D set domain protein methyltransferase, domain 1 21 206 - -
Vvi7g1547 408 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 42 333 - -
Vvi7g1547 408 SUPERFAMILY SET domain 42 211 IPR046341 -
Vvi7g1547 408 ProSiteProfiles SET domain profile. 10 193 IPR001214 GO:0005515
Vvi7g1547 408 PIRSF RMS1_SET 38 389 IPR011383 GO:0016279|GO:0018026
Vvi7g1547 408 MobiDBLite consensus disorder prediction 125 162 - -
Vvi7g1547 408 MobiDBLite consensus disorder prediction 139 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1547 45 405 NAC Transcription Factor Family AT3G56570 51.707 1.36e-118 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1547 K05302 - vvi:100254620 684.1