Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1531 ATGGTGCAGTGGGGGGCTTGTCGAAGAGTTTTCATCACTCAGCATGGAGAGAACAACTCTCAACTCTCATCTAACACTGTTGAAAAAGATGGAGATGAAGAAGCCATGGTAGCTGACTCCCATTTGATAAAAGACAGCCAGAAGAGCAAGCGCCTTTGCTCTGTTCCTCGTCAAGAGCCAAATGCAGTAAGATCTGAGAAGCTCTGGGATTCTTGTCACCGGGTTTTCATTAATCAGCAAGGAGAGAACAACCAACAACCTCCATCTAGCATTGTTAAGGAGGATGATGATTCAGACAGAGATGATGAAACAATAACAGCTGAACCCCTTGTGCCAGAGGAAAGGCAGAAGAGAAAGCGTACTTGCCCTATCCAATTTCAAGAAATGGACACAGCAAGATATCAGAAGCAAAGGCAAAGTCGTCATTGCAATAACAATAAAAAGAACAAGGTCAAGAGTTCCATAAACAGATGGTCTGAAGATAGGTATAAGCTGGCAGAGGAAAGCATGCTAGAGATCTTGAAGGCTGAAGGGGCAGTATTTGGCAATGCGATTACCCGACCAGCACTGAGATCGGCAGCTCGTAAGCGCATTGGCGACACTGGGCTACTAGACCATCTACTTAAGCACATTGATGGCAAGGTAGCACCAGGTGGTGCTGAGCGATTCAGACGGTGGCACAACACAAATGGAGTGATGGAATATTGGTTGGAGGGTGCTGACATGGTTGATATTCGGCGTGAGGCTGGGGTGCAAGATCCTTTCTGGGTCCCCACAACTTCATCTGAGCCGGGTGACCTCTCTCATGATCCCATTATAGCTCAAGAGTTGAAGCTGCTTAAGGCAGAAATGGCCAAAATGAAGAAAGATGTGCAGAATCTGGTATCCAAGAAGAGAGAGGAAGTTCAACCTTCAACCACTAATCAAAGGCCAAAACTCAACAGTTCCTTGCTTCAGCTACAGGAAACACGGAAGGAACTAGAGAATTGGAAAGCTAAGACTGAGAAACAGCTGACAGAGATTTCAAATTCTTTGAACAGTATGCAGGAAATGCATGAAGAATTGGTGGAATGGAAAGCTAAAATTGAGCAGCAATTGACAGAGACTTCAAATTCGTTGAGTGTTGTGCAGGTATCAAATCAGTGTGCTACCTTCAGTCCCTCAGCTTCGGGGGAATGGGAAAATTGGTTTGGGAGCAATGAGCTGGGCAATATTCCAGTAGATTTTCCTAATTGGCTGGAGAATGGTGACCTAGTTGATATGGTACCAGAGGAGATAGTACCAGATCCTTACAAAGCCCCACCATCCGAGGAGAAGCCTAGTAATATCCTTGTTAAAATCGAACCCAAGACCACTGGACAAGACCCCTGCCAAGCCTCACCACCTGGGAAGAAGCTGCCCAGTGACAACCTAGTTGATATTGAGCGAGAGGCAACAGTGCAACAACTTTACCTAGCCCCACCTCCTGTGGAGAAGCCTCATGATGCCCGATTTAATATTGAGCCAAAGGCACTGGGCCTAGATCTTTACCAAGGCCCATCAACCTGGAAGAGACCTAGTAATAACCCATCTATTGACCCCTCTTGCACTAGAGAGCTGGAGCTGCTGAAGGAAGAACTGGCTGCAGTCAAGAGAGATGTGCAAGATCTAGAACCCAACAAGCCAGAGGAAGATAGTGTTGATTCGACTCCCAATTCATCTTCCTGTACTGATTTGGACCTTGATAATTCATTGCTGCTGATGCAGGAAATGCAGAAGGAATTGGTAAAATGGAAAGCTAAGATTGAGCAGCAACTGGCAGGGATTTCGGTTACTTTGAATGGTATGCATTCAAAGTTGGTGCCAAAGGTTGAAACCGTAGAATAG 1866 0.4587 MVQWGACRRVFITQHGENNSQLSSNTVEKDGDEEAMVADSHLIKDSQKSKRLCSVPRQEPNAVRSEKLWDSCHRVFINQQGENNQQPPSSIVKEDDDSDRDDETITAEPLVPEERQKRKRTCPIQFQEMDTARYQKQRQSRHCNNNKKNKVKSSINRWSEDRYKLAEESMLEILKAEGAVFGNAITRPALRSAARKRIGDTGLLDHLLKHIDGKVAPGGAERFRRWHNTNGVMEYWLEGADMVDIRREAGVQDPFWVPTTSSEPGDLSHDPIIAQELKLLKAEMAKMKKDVQNLVSKKREEVQPSTTNQRPKLNSSLLQLQETRKELENWKAKTEKQLTEISNSLNSMQEMHEELVEWKAKIEQQLTETSNSLSVVQVSNQCATFSPSASGEWENWFGSNELGNIPVDFPNWLENGDLVDMVPEEIVPDPYKAPPSEEKPSNILVKIEPKTTGQDPCQASPPGKKLPSDNLVDIEREATVQQLYLAPPPVEKPHDARFNIEPKALGLDLYQGPSTWKRPSNNPSIDPSCTRELELLKEELAAVKRDVQDLEPNKPEEDSVDSTPNSSSCTDLDLDNSLLLMQEMQKELVKWKAKIEQQLAGISVTLNGMHSKLVPKVETVE* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1531 621 Coils Coil 313 368 - -
Vvi7g1531 621 MobiDBLite consensus disorder prediction 78 105 - -
Vvi7g1531 621 PANTHER PROTEIN DYAD 468 612 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vvi7g1531 621 MobiDBLite consensus disorder prediction 545 570 - -
Vvi7g1531 621 Coils Coil 277 297 - -
Vvi7g1531 621 Coils Coil 574 601 - -
Vvi7g1531 621 Coils Coil 533 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1531 Vvi-Chr7 20323659 20326168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1531 130 238 PHD Transcription Factor Family AT5G22260 37.607 2.21e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1531 - - vvi:100247650 1226.08