Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1530 ATGGGAAACAAGCAAGATAGTGAAACGAGGAGAAGAGCTCCAAAGGGGCACTTTGTGGTATATGTGGGAGAAGAGATGAAGAGGTTTGTGGTTCCCATATCATACTTGAAGAACCCCATGCTGCAGCAGCTGCTAGCGGAAGCTGCAGAGGAGTTCGGGTTCGATTCCCAGAAGAGAATCGTTCTGCCTTGTGATGAGTCTACTTTCCAAAGGATCACAGATTTCATGATCAAGAGCACTTAA 243 0.465 MGNKQDSETRRRAPKGHFVVYVGEEMKRFVVPISYLKNPMLQQLLAEAAEEFGFDSQKRIVLPCDESTFQRITDFMIKST* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1530 80 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 72 IPR003676 GO:0009733
Vvi7g1530 80 Pfam Auxin responsive protein 7 74 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1530 Vvi-Chr7 20315247 20315489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1530 5 76 Calmodulin-binding Proteins AT5G20810 41.667 3.11e-17 70.1