Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1528 ATGTTGAGGTTCCATGTTGGAGGTAAAGTAGTGGAGGATGTTGATTTGTTGAGGAAGAGGCACTGGCCTTGGCGCTTGGATGTATGGCCTTTCGCCATCCTCTATACCATTTGGCTAGTAACCGTTGTTCCCAGCATTGACATATCCGACGCCATCATAGTTTTTGGTGGACTTGTGGTACTTCATATTCTGGTCTGGCTCTTCACTGCTTGGTCAGTGGAATTTAGATGCTTTGTTCAGTATAGTAAGGTTAATAGCATTCAACAAGCTGATGCTTGCAAAATAACTCCAGCAAAATTCTCTGGATCTAAGGAAATTGTACCACTTCATTTTCGTAAATTACTGGTAGGTTCTTCATCCTCAGATGTAGAAGAGATTTACTTCGATTTCAGAAAGCAATGCTTCATCTATTCAAAGGAGAAGGAGACATTCTTCAAGCTTTCTTATCCTTCCAAGGAAAGCTTCGGCTACTATCACAAAAGTACTGGACACGGCTCAGAAGCTAAAGTTGTTGCTGCTACTGAGAAGTGGGGACGGAATGTATTTGAATATCCACAGCCCACATTCCAGAAATTAATGAAAGAGAACTGTATGGAGCCATTTTTTGTTTTTCAGGTCTTCTGTGTCGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTTACCCTATTCATGCTATTTATGTTTGAATCTACAATGGCAAAAAGTCGGCTAAAGACTCTAACTGAGCTCAGACGTGTAAGAGTGGACAATCAGACGATCATGGTGCATCGCTGTGGGAAGTGGGTGAAGCTCTCTGGGACAGAACTTCTCCCAGGGGATGTTGTCTCCATTGGACGCTCTTCTGGCCAGAATGGAGAGGATAAGACTGTACCAGCTGACATGCTTATATTAGCTGGAAGTGCTATTGTGAATGAAGCCATTCTTACAGGCGAATCTACCCCCCAATGGAAGGTATCAATCATGGGTAGGGGAAATGAGGAGAAGTTATCAGTGAAGCGAGATAAAAACCATGTCCTTTTTGGTGGGACAAAGATATTGCAGCATACTCCTGATAAGACCGTTCATCTTAAAACCCCAGATGGGGGCTGCTTGGCTGTTGTTCTACGAACTGGCTTTGAAACAAGTCAAGGAAAACTGATGCGGACCATTTTATTTTCAACAGAGAGGGTTACTGCTAACAGCTGGGAAAGCGGGCTCTTCATTTTGTTCTTAGTCATATTTGCAGTAATAGCTGCCGGTTATGTGCTCAAAAAGGGCCTAGAAGATCCAACAAGAAGTAAATACAAGCTTTTCTTGAGTTGTTCATTGATTATTACGTCTGTGATCCCCCCTGAGTTGCCAATGGAGTTATCAATAGCTGTTAATACATCTTTGATTGCATTGGCACGGCGTGGGATATTTTGTACGGAACCTTTTCGAATTCCATTTGCTGGAAAAGTTGACATATGTTGTTTTGATAAGACTGGAACACTTACATCAGATGACATGGAGTTCCGTGGAGTCACTGGGTTGACGGATGCTGCAGATCTAGAGTCAGATATGAGTAAAGTGCCTGCCCGCACTGTTGAAATTTTGGCTTCCTGTCATGCCTTGGTGTTTGTGGACAACAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCCCTTAAAGGAATAGATTGGTCTTACAAATCTGATGAGAAGGCTGTGCCCAAAAAGGGAAGCGGCCAAGCTGTGCAAATTGTTAAGAGACACCACTTTGCCTCTTACTTGAAACGAATGTCAGTTGTTGTTCGCGTTCAGGAGGAATTCCTTGCTTTTGTGAAGGGGGCTCCAGAAACTATTCAGGAGAGGCTTGTTGATTTGCCACCTTCCTATGTTGAGACCTACAAGAAATACACGCGTCAAGGATCTCGTGTTTTGGCCCTTGCTTTCAAGTCCCTTCCAGAAATGACAGTTAGTGAAGCTAGGAACATGGATAGAGATGTGGTGGAGAGTGGCCTTACCTTTGCAGGTTTTGCGGTATTTAACTGTCCTATTAGAGCAGATTCAGCTACTGTTCTGTCTGAATTAAAAGGATCATCCCATGACTTGGCAATGATTACTGGTGATCAAGCTTTGACAGCTTGTCATGTTGCTGGCCAAGTTCATATTATTTCAAAGCCAACATTAATTCTTGGTCCAGCAAGGAATAGTGAAGGATACGAGTGGATTTCACCAGATGAAACTGAGATAATTCGCTACAGTGCGAAAGAGGTTGAAGCTTTATCAGAAACCCATGATCTCTGCATTGGAGGTGACTGCTTCGAAATGTTACAACAGACTTCTGCTGTTCTACAAGTCATTCCCTTTGTGAAGGTATTTGCAAGGGTTGCTCCTGAGCAAAAGGAACTTATATTGACCACTTTCAAAACAGTGGGAAGGATGACATTGATGTGTGGTGATGGAACCAATGATGTTGGAGCTCTGAAACAGGCCCATGTAGGAGTTGCTTTATTGAATGCTATGCCACCAACTCAAACTGGAGGATCTTCCTCAGAAGCATCTAAAGATGAAACTAGCAAGTCTGTCAAGTCAAAGAAACCCAAGCCTGCAACAGAAACAACCAAAGCCCTTAGTCTGAATGGAGAAGGCCCTTCAAAAGGCAGATCTGCCTCAAAGTCAGAATCCACCAGTCACTCAGCTGCTAATCGCCATCTGACGGCTGCAGAGATGCAACGTCAGAAGCTGAAGAAGCTCATGGATGAACTGAATGAGGAGGGTGATGGTCGCGCAGTTCCCATTGTGAAGCTTGGGGATGCTTCAATGGCATCACCATTCACAGCAAAGCATGCATCAGTTGCTCCTACCACTGACATTATTCGTCAAGGCCGCAGTACTCTAGTGACAACCCTTCAGATGTTTAAGATTCTTGGCCTCAACTGCCTTGCAACAGCTTATGTGCTGAGTGTCATGTATTTAGATGGCGTCAAACTTGGTGATGTCCAAGCTACCATAAGCGGTGTATTCACAGCTGCTTTTTTCCTATTTATCTCACATGCACGACCCCTTCCTACACTATCAGCTGCACGTCCCCACCCTCATGTCTTCTGCTCCTACGTCCTCCTGTCTCTCCTAGGACAGTTTGCCCTCCATTTGTTCTTTTTGATTTCTTCTGTGAAGGAGGCTGAGAAATATATGCCAGATGAATGCATTGAGCCAGACTCTGATTTCCACCCTAACCTTGTGAACACTGTATCATACATGGTGAACATGATGATCCAAGTGGCAACCTTTGCTGTGAACTACATGGGCCATCCTTTCAACCAGAGTATCCCAGAAAACAAACCATTTTTCTATGCCCTTTTTGGCGCTGTTGGTTTCTTCACAGTCATCACCTCTGATTTATTTAGGGACTTGAATGACTGGTTGAAATTGGTGCCCATGCCAGTGGGATTGAGGAACAAGCTACTGATCTGGGCTTTCCTCATGTTCTTGGGCTGCTATTCATGGGAAAGATTGTTGAGGTGGGTTTTCCCTGGTCGGATTCCAGCCTGGAAGAAGCGACAAAGAATGGCTGCTGCTAACCTAGAAAAGAAGCTACTCTGA 3573 0.4414 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVVLHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRKLLVGSSSSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLILAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEFLAFVKGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVVESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTLILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPFVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGSSSEASKDETSKSVKSKKPKPATETTKALSLNGEGPSKGRSASKSESTSHSAANRHLTAAEMQRQKLKKLMDELNEEGDGRAVPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAARPHPHVFCSYVLLSLLGQFALHLFFLISSVKEAEKYMPDECIEPDSDFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSIPENKPFFYALFGAVGFFTVITSDLFRDLNDWLKLVPMPVGLRNKLLIWAFLMFLGCYSWERLLRWVFPGRIPAWKKRQRMAAANLEKKLL* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1528 1190 MobiDBLite consensus disorder prediction 861 894 - -
Vvi7g1528 1190 CDD P-type_ATPase_cation 169 1106 IPR047820 -
Vvi7g1528 1190 FunFam Cation-transporting ATPase 483 667 - -
Vvi7g1528 1190 Gene3D - 668 846 IPR023214 -
Vvi7g1528 1190 SUPERFAMILY Calcium ATPase, transduction domain A 253 386 IPR008250 -
Vvi7g1528 1190 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Vvi7g1528 1190 PRINTS P-type cation-transporting ATPase superfamily signature 808 827 - -
Vvi7g1528 1190 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Vvi7g1528 1190 PRINTS P-type cation-transporting ATPase superfamily signature 689 699 - -
Vvi7g1528 1190 MobiDBLite consensus disorder prediction 830 894 - -
Vvi7g1528 1190 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 677 IPR023299 GO:0000166
Vvi7g1528 1190 FunFam Cation-transporting ATPase 668 844 - -
Vvi7g1528 1190 FunFam Cation-transporting ATPase 225 387 - -
Vvi7g1528 1190 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 1168 IPR023298 -
Vvi7g1528 1190 SFLD p-type atpase 468 954 IPR044492 -
Vvi7g1528 1190 SUPERFAMILY HAD-like 482 834 IPR036412 -
Vvi7g1528 1190 Coils Coil 895 915 - -
Vvi7g1528 1190 MobiDBLite consensus disorder prediction 846 860 - -
Vvi7g1528 1190 NCBIfam P-type ATPase of unknown pump specificity (type V) 40 1148 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Vvi7g1528 1190 Gene3D - 482 667 IPR023299 GO:0000166
Vvi7g1528 1190 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1167 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Vvi7g1528 1190 Gene3D - 224 387 - -
Vvi7g1528 1190 Pfam haloacid dehalogenase-like hydrolase 484 712 - -
Vvi7g1528 1190 ProSitePatterns Hypothetical cof family signature 2. 808 830 - -
Vvi7g1528 1190 Pfam E1-E2 ATPase 254 467 - -
Vvi7g1528 1190 NCBIfam HAD-IC family P-type ATPase 402 512 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi7g1528 1190 SFLD C1.7: P-type atpase like 468 954 - -
Vvi7g1528 1190 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1528 1 1188 Primary Pumps ATPases AT5G23630 78.841 0.0 1942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1528 K14950 - vvi:100257916 2355.87