Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1524 ATGGAGAGGAAATCTCTTGGCTTCTTCTTCTTCCTCCTCCTCATCCTCTTGGCTTCTCAGATGGTGGTGCCAAGTGAGGCAAGAGTCTGTGAGTCACAAAGCCATAAGTTCGAGGGTGCATGCATGGGAGACCACAACTGTGCTCTGGTCTGCAGGAATGAAGGCTTCTCCGGCGGCAAGTGCAAAGGCTTGCGCCGCCGATGCTTCTGCACCAAGCTCTGTTAA 225 0.5333 MERKSLGFFFFLLLILLASQMVVPSEARVCESQSHKFEGACMGDHNCALVCRNEGFSGGKCKGLRRRCFCTKLC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1524 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Vvi7g1524 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Vvi7g1524 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Vvi7g1524 74 CDD Knot1 39 71 IPR003614 GO:0006952
Vvi7g1524 74 Gene3D - 28 74 IPR036574 -
Vvi7g1524 74 PANTHER DEFENSIN-LIKE PROTEIN 1 6 74 - -
Vvi7g1524 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Vvi7g1524 74 Pfam Gamma-thionin family 28 74 - -
Vvi7g1524 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1524 10 74 Plant Defensins Gene Families AT5G63660 60.000 3.11e-27 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1524 - - vvi:100252765 147.132