Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1514 ATGGCGCTATTAGTTCGGTCTCTCCTCCGCAGATCATCATCGCCTTCATCGTCGAATCCATTCTCCGGAGGCGTTGGCGGTGCGGTGTGGAGGAGATGGATGAGCCAGGAGGCTGCCGGGTATCACTTGAGCGGAGGGCCGGCGCACATGCGCGGAGCAGTGTTTTGGGAGGTTAACAGGCCTCTCACCATCGAAGATTTCCACATGCCTCGCCCTAAGGCTGGAGAAGTTCTCATCAAAACCAAAGCCTGTGGAGTATGTCACTCTGATCTGCATGTTATCAAAGGAGAACTTCCATTTGCTAGCCCTTGTGTGGTGGGGCACGAGATAACGGGTGAGGTTGTTGAACATGGCCCACTCACGGACACCAAGATTACTAAAAGATTTCCTATTGGATCTCGTGTTGTTGGAGCTTTCATCATGCCCTGTGGTAGCTGTTTCTTCTGTAACAGGGGCCAGGATGATTTATGTGAGGATTTCTTTGCTTATAATCGGGCAAAAGGAACCCTTTATGATGGTGAAACAAGGCTATTCCTACGCAACAATGGGAAACCAGTATTCATGTACAGTATGGGTGGCCTTGCTGAATACTGTGTTGTGCCTGCCCATGGATTAACCAACTTACCAGACTCATTGCCATATACTGAGTCTGCAATTTTAGGATGTGCAGTCTTTACTGCTTATGGTGCTATGGCGCATGCAGCTGAGGTGCGTCCTGGCAATTCTGTTGCTGTAATTGGTATTGGGGGTGTTGGCTCAAGTTGCTTGCAGATAGCACGGGCATTTGGTGCCTCTGATATTATTGCTGTGGATGTTAATGATGAAAAACTGGAGAATGCGAAGGTTTTTGGTGCCAGTCATACTGTAAATGCACTTAAAGAAGATGTTGCTGATAAGATTAGAGAAATAACAGGAGGAAGGGGTGTGGATGTTGCTGTGGAGGCCTTGGGAAAACCGCTGACATTTGCACAGTGCACCCAAAGTGTACGAGATGGAGGAAAAGCTGTAATGATTGGACTTACGAAATCTGGTGCTGTAGGGGAGATAGATATAAATCGCCTTGTTCGCAGACAGATAAAAGTCATTGGCTCATATGGAGCACGGGCAAGGCAGGATCTTCCCAAGTTGGTTAAGCTGGCAGAAACCGGTATCTTCAATCTCAAGGCAGCTGTTTCCAGAAAGTGTGAATTTGAGGAGGTTGGCAAGGCATATCAAGATCTTGACCAGGGAAAGATTGTTAGCCGAGCTGTGGTTGAGATAATGTAG 1266 0.4771 MALLVRSLLRRSSSPSSSNPFSGGVGGAVWRRWMSQEAAGYHLSGGPAHMRGAVFWEVNRPLTIEDFHMPRPKAGEVLIKTKACGVCHSDLHVIKGELPFASPCVVGHEITGEVVEHGPLTDTKITKRFPIGSRVVGAFIMPCGSCFFCNRGQDDLCEDFFAYNRAKGTLYDGETRLFLRNNGKPVFMYSMGGLAEYCVVPAHGLTNLPDSLPYTESAILGCAVFTAYGAMAHAAEVRPGNSVAVIGIGGVGSSCLQIARAFGASDIIAVDVNDEKLENAKVFGASHTVNALKEDVADKIREITGGRGVDVAVEALGKPLTFAQCTQSVRDGGKAVMIGLTKSGAVGEIDINRLVRRQIKVIGSYGARARQDLPKLVKLAETGIFNLKAAVSRKCEFEEVGKAYQDLDQGKIVSRAVVEIM* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1514 421 Gene3D - 54 410 - -
Vvi7g1514 421 CDD Zn_ADH10 50 419 - -
Vvi7g1514 421 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 212 385 IPR036291 -
Vvi7g1514 421 Gene3D - 227 364 - -
Vvi7g1514 421 FunFam Sorbitol dehydrogenase 227 365 - -
Vvi7g1514 421 SMART PKS_ER_names_mod 57 418 IPR020843 GO:0016491
Vvi7g1514 421 FunFam Alcohol dehydrogenase (Zinc) 54 239 - -
Vvi7g1514 421 SUPERFAMILY GroES-like 47 253 IPR011032 -
Vvi7g1514 421 Pfam Alcohol dehydrogenase GroES-like domain 75 207 IPR013154 -
Vvi7g1514 421 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 49 418 - -
Vvi7g1514 421 Pfam Zinc-binding dehydrogenase 250 380 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1514 Vvi-Chr7 19954789 19970186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1514 67 420 Monolignol Biosynthesis Gene Families AT4G37990 26.230 1.41e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1514 - - vvi:100260980 819.305