Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1505 ATGGCCGCCAAAATCAATTCACTCGCAGCTCTCGTATCTCTCCAAGCTTCACACCATCACCACAACTCCACGCCCTTCTATTTTTCTCCATTTTCTCCACATCTCTCCACCACCCTCACCTCCCGCCGGCGCTCTCTGAGGTCCGCTGTCGTTGCGCAGTCCACCGCCGGAACCCAGTCCAAGGCCCCCTCCGATGTCGATTTAGCCGCCGTTTCTGGTCAAGATCGTCTCTTGAAGGTTCCAATATCAAATATCAGGAATTTCTGCATAATTGCTCATATTGATCATGGGAAATCAACTTTAGCAGATAAGTTGCTGCAAATGACGGGTACGGTACAGAAGCGGGAAATGAAGGAGCAGTTTCTTGATAACATGGATCTAGAGCGTGAAAGAGGAATCACAATCAAACTACAGGCAGCTCGAATGCGTTATGTATTTGAAAATGAACCATATTGCCTGAATCTAATTGATACTCCAGGGCATGTGGACTTCTCCTATGAGGTTTCTCGTTCTCTCGCTGCATGTGAAGGTGCTCTCCTGGTTGTAGATGCTTCTCAGGGAGTGGAAGCTCAAACACTAGCTAATGTTTATCTGGCCCTGGAGAACAACTTAGAAATCATCCCAGTTTTGAACAAAATAGATCTTCCAGGTGCTGAACCAGTTCGTGTTTCTCAGGAGATTGAAGAGGTTGTTGGGTTAGATTGTAGCGATGCAATACACTGCTCTGCCAAGGAAGGAATAGGTATAACTGAAATTTTGAATGCAATTGTTAAACGGATTCCCCCACCCTGTGATACTGCAGAAAGACCTTTGAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGAGTGATCGTATATTTTCGAGTCATTGATGGGACTATAAAGAAAGGTGACAGGATTTATTTTATGGCTAGCAAGAAGGATTATTTTGCTGATGAAATTGGAGTTTTATCTCCCAATCAGTTGCAGGCTGATGAATTATATGCTGGTGAGGTGGGTTACCTTGCAGCTTCTATAAGATCTGTAGCAGATGCAAGAGTGGGTGACACCATTACTCACTATGGTAGGAAGGCGGAAAACTCCCTGCCTGGATATGAGGAAGCTACTCCAATGGTGTTTTGTGGCTTGTTTCCTGTTGATGCAGACAAGTTTCCTGATTTACGTGATGCACTGGAAAAACTTCAACTGAATGATGCTGCATTAAAGTTTGAGCCTGAGACATCCAGTGCCATGGGCTTTGGCTTTAGGTGTGGGTTCTTGGGTCTTCTCCATATGGAAATCATTCAGGAAAGGCTTGAGAGAGAATACAACTTGACCTTAATAACTACTGCTCCAAGTGTTGTATACAGAGTGAACTGTATAAATGGTGATACTGTTGAGTGCTCAAACCCATCCTTACTTCCTGAACCTGGAAAGAGGACATCAATTGAGGAGCCATATGTTAAGATTGAGATGCTCACTCCAAAAGACTATATCGGTCCTCTCATGGAATTGGCTCAAGACCGTAGAGGAGAGTTCAAAGAAATGAAATTTATCACTGAGAATAGAGCATCAATTACCTATGAATTACCCTTAGCAGAGATGGTAGGAGATTTTTTTGATCAGCTGAAGTCCAGAAGTAAAGGTTATGCTAGCATGGAATACTCTTTTCTGGGGTACAAGGAGAGTGAATTAATAAAACTTGATATTCAGATTAATGGTGAACGTGTGGAACCATTGGCAACTATTGTACACAAAGATAAGGCGTATGCTGTGGGGAGAGCATTGACTCAAAAGCTTAAGGAACTTATACCACGGCAAATGTTTAAAGTTCCAATCCAAGCATGTATAGGAGCCAAAGTCATTGCTAGTGAATCTTTATCAGCAATTAGGAAGGATGTTCTATCCAAATGCTATGGTGGGGACATCACAAGGAAAAAGAAATTGCTTAAGAAACAGGCTGAAGGAAAGAAAAGAATGAAGGCAATTGGTAAAGTTGATGTACCTCAAGAGGCTTTCATGGCTGTCTTGAAACTTGAAAAGGAGGTATTATGA 2043 0.4249 MAAKINSLAALVSLQASHHHHNSTPFYFSPFSPHLSTTLTSRRRSLRSAVVAQSTAGTQSKAPSDVDLAAVSGQDRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPVRVSQEIEEVVGLDCSDAIHCSAKEGIGITEILNAIVKRIPPPCDTAERPLRALIFDSYYDPYRGVIVYFRVIDGTIKKGDRIYFMASKKDYFADEIGVLSPNQLQADELYAGEVGYLAASIRSVADARVGDTITHYGRKAENSLPGYEEATPMVFCGLFPVDADKFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITTAPSVVYRVNCINGDTVECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRRGEFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDIQINGERVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAIRKDVLSKCYGGDITRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1505 680 FunFam Translation factor GUF1, mitochondrial 366 447 - -
Vvi7g1505 680 Pfam Elongation factor G C-terminus 479 564 IPR000640 -
Vvi7g1505 680 CDD EF4_III 373 448 - -
Vvi7g1505 680 Gene3D Translation factors 266 365 - -
Vvi7g1505 680 Pfam GTP-binding protein LepA C-terminus 568 674 IPR013842 -
Vvi7g1505 680 Gene3D - 82 264 IPR027417 -
Vvi7g1505 680 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 77 677 IPR027518 -
Vvi7g1505 680 SUPERFAMILY EF-G C-terminal domain-like 372 450 IPR035647 -
Vvi7g1505 680 PANTHER TRANSLATION FACTOR GUF1-RELATED 61 675 IPR006297 GO:0005525
Vvi7g1505 680 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 123 138 IPR031157 -
Vvi7g1505 680 NCBIfam small GTP-binding protein domain 86 256 IPR005225 GO:0005525
Vvi7g1505 680 SUPERFAMILY Translation proteins 245 367 IPR009000 -
Vvi7g1505 680 SUPERFAMILY EF-G C-terminal domain-like 479 574 IPR035647 -
Vvi7g1505 680 Hamap Elongation factor 4 [lepA]. 80 678 IPR006297 GO:0005525
Vvi7g1505 680 Gene3D - 448 559 - -
Vvi7g1505 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 83 264 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 FunFam Translation factor GUF1, mitochondrial 266 365 - -
Vvi7g1505 680 CDD EF4_II 271 356 - -
Vvi7g1505 680 SMART EFG_C_a 478 566 IPR000640 -
Vvi7g1505 680 FunFam Translation factor GUF1, mitochondrial 560 634 - -
Vvi7g1505 680 PRINTS GTP-binding elongation factor signature 154 164 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 PRINTS GTP-binding elongation factor signature 130 138 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 PRINTS GTP-binding elongation factor signature 206 215 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 PRINTS GTP-binding elongation factor signature 87 100 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 PRINTS GTP-binding elongation factor signature 170 181 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 Gene3D - 560 634 IPR038363 -
Vvi7g1505 680 CDD lepA_C 481 560 IPR035654 -
Vvi7g1505 680 CDD LepA 86 263 - -
Vvi7g1505 680 FunFam Elongation factor 4 82 265 - -
Vvi7g1505 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 285 IPR027417 -
Vvi7g1505 680 Pfam Elongation factor Tu GTP binding domain 84 261 IPR000795 GO:0003924|GO:0005525
Vvi7g1505 680 Pfam Elongation factor Tu domain 2 285 355 IPR004161 GO:0005525
Vvi7g1505 680 Gene3D Elongation Factor G (Translational Gtpase), domain 3 366 447 - -
Vvi7g1505 680 FunFam Translation factor GUF1, mitochondrial 448 558 - -
Vvi7g1505 680 NCBIfam translation elongation factor 4 84 675 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1505 Vvi-Chr7 19787006 19813493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1505 85 214 Eukaryotic Initiation Factors Gene Family AT3G22980 45.113 1.82e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1505 K21594 - vvi:100252626 1304.66