Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1504 ATGGTCCAAAGAAAGGTAGGCAACAAGCTTGGAATCCAAGCTGATCATGTTAGTAAGACCGAGAAGCGTTTGGGGAACCTCAAACCGGGGTTTTCCCAGCACCAGGATGGCAGAAACAGGGCTGCTGACATGAAGAAGAAAATGAAGAAATCAAGATCAATCAAGCTTTCAGATATTGAGAGCTTAAGATCATCACCTCTGCAGCCTGGCAAGCCGCCTCCTCTCAGTGCCCAACCAGCTGCAGCAAAGCAATCTGTGATCAGGCCACCTGATGGGTCGCCAAATTATATGAAGTCCACCAGCTGTTCTGATGCAAGGAAGGAGAGTTCCCAGGTGAGTCCCCGGAGTCCTCAAACTGGTTCTGGCAGTGGGCGGAGGCTTTCAAGTAATTCAAAAGTTTGCTCCGCTTCCACCCATAGAACTGCAAGAACATCAAGTTTGAAACTGGTGAAGACCTTAACAAAGAGTCCTAGCTTTAAACCGGTGAGAGCTTCTACCAAGAAGTGCTCCAAGGTTGCTCTGTGTGCAGATATGGATGCACATGGAGCTACGTGTTCTTCAACCCTGAAAGATTCCAACTTTCCTGAATATCTCATGCTCAATCCTGGGGGAACTGAATATGAAGGAACTTCAGTTATCAAGGTTTGCCCTTATACTTACTGTTCTCTCAACGGTCATCACCATGCTCCTTTGCCTCCATTGAAGTGCTTCTTGTCAGCAAGGCGACGTGTGCTGAAGACCCAGAAGACTATGAAATTGGAAGCTCTATCCCCGCGAAGAGCTAAGCTGCCTGGTGATGGCATGAAATCAATTGATACTGCGCAGGTGATCATTGATGGGAAACCTGCTATTCAAGAAGTTGATTCAGGTAGCTCAGCAGTGTCCCCTCTCATACAAGAAGTTGGCATGGATTTTTTCATTGAAATCTATGCTAAAAATAGAGATGACTCTGCTGAAGCAATTGGAAGCAACATACCTGATCAGGATGATGAGGAGATAGTTGATGTTGCTGGGGAAACTGGACATCTCAATGACATCATGCCTTCAGTTGAAGGTGGCGATGAAACAACAAAAGATGATGGGCAAGTTGCAGACAGCGAATCAGATGAACCACCAGTCTCTGAGATTGATTCTGGGGACAATCTGGATCAGAACAGTGATATCGTTTTCGCTGAAACCTCTTCTGAACGAGACCAGAGGGCAGAGGAAGCAGATGAAGACTATCCACCTTCCTTGGTTCCAGGAGAAATCACTCCTGGATACAGCAGTGATGGATGGGAATCAAAATCTGAAGCTACTGATATGGACTGGGAAGAGGGGCGATTTTCGGCCCAACATCCTCATAATTCAACTCAAGGCAACGATGAGTCTAATTTGGGAAGCGGTTACCTGCCGGAGATCAAGCATCCTGATTTGCATGATGAACCCATCTCCAAGCCAGATGATATTATCAGCAAGTGCTTTGAGGAGATTTTTTCTGAAGTAAAGCAAGAGGTCATTGAAGATGAAAGTTCATGCTTTGAAGTGCAATTCAGCGACAGTGATTCAGATTCAGATAGCATAGACCAGAATTTGGAGAATGATGAATCTAGCCAAATGTCCGAGAGCCCAAATGAAGAGCAAATTTCTTCAATTTTCAAGGAAGTAGCAACTCATGAAGAAGAAGATGGAAAGGCCGGGATATATGATTTCTTCAGCATTCAAGTTGATTCATCTCCAGTTGAAGAGGCAATTGACGAACCAGTGGCAGCCAATAATGAGAAGAGTGGAGTTTCTGAAGCAGGGTCTTTAATCCTGGAGATGAATCCCCAACTTGGGGATGTTGAAGCCACTGGTGACATTGAAATTGCGGATAAACCTATGATTGATCAACAGGAGAGTGGATTTCTTCAAGATGATGATGCAAATGTGCAGCTCAAGAACCAAGACTCTGATTCGTCTCAAGATTTGAACATTACAGATCAGGATGAAACAAATGAAGATTTCAATGGAGGTGATAAGGCCAGTGAAGACCACCAGTTTGATTCCATCACTGAAGGAAGAAGGCTGAGTGAAGAGGCATTCAATGAAACCGTCCTTCTGAAGACTGAGTATTTAGAAACAAATCAGAATGCTGCCACAAGAGATTTTGTCCTGGAGCAGGAACTCATCAATGGTGGTGATGAAGGAGGAAAGGAAGAGAAAGAACAAGCGGATAGCGTTGCTGATAACTGTAAATCAAGTCGAGCATTTTCTGATGAAAGCCTTCTTGCAGAAACTCAGGATCACCCATGTGACAACAATGTTGAAGACAAGATTGACTCTGAGGAGGATAAAGCTCAAGCTGGGAAGTTCAAGATCACAAGTTCCATGGATTTGGAGGAACACAGTGATTCAAAAATGAAGAAATCTGCTTTAGCTGAAAACAGTGATGGAGAAGTTGATAACATGGAAGTGGAAGATAGAACCGAACCAGAAGCAGCAGATACACGCCTCAGTTCCAACAATAGAACCAACTCAGAAGTCAGAACTACATTCTTCCCTGCACGACGCAACACCAACCAAGAACTAGTCACAACCTCCAATAAGCCAAAAGGAGCAATCAGACGCAGGAGACCTGTCAAGGACAATGAAGAACCAAGAAGCTTCAATCCACGTGAACCAAATTACTTGCCACTAGAGCCTGACCCAGAAGCAGAGAAGGTTGATCTCAGGCATCAAATGATGGATGAAAGGAAAAACTCAGAGGAATGGATGCTTGATTTTGCACTCCGCAAGACTGTCACAGAACTTGCTCCAGCTAGGAAGAGGAAAGTGGCACTGCTTGTTGAAGCTTTTGAAACAGTACTCCCATTGCCCAAATATGAAACCCGTATCAGGCATACTTCAGCAGCTTTTGCTCACCCAAGACCCATTCAAGCCTGCAGCTGA 2910 0.4471 MVQRKVGNKLGIQADHVSKTEKRLGNLKPGFSQHQDGRNRAADMKKKMKKSRSIKLSDIESLRSSPLQPGKPPPLSAQPAAAKQSVIRPPDGSPNYMKSTSCSDARKESSQVSPRSPQTGSGSGRRLSSNSKVCSASTHRTARTSSLKLVKTLTKSPSFKPVRASTKKCSKVALCADMDAHGATCSSTLKDSNFPEYLMLNPGGTEYEGTSVIKVCPYTYCSLNGHHHAPLPPLKCFLSARRRVLKTQKTMKLEALSPRRAKLPGDGMKSIDTAQVIIDGKPAIQEVDSGSSAVSPLIQEVGMDFFIEIYAKNRDDSAEAIGSNIPDQDDEEIVDVAGETGHLNDIMPSVEGGDETTKDDGQVADSESDEPPVSEIDSGDNLDQNSDIVFAETSSERDQRAEEADEDYPPSLVPGEITPGYSSDGWESKSEATDMDWEEGRFSAQHPHNSTQGNDESNLGSGYLPEIKHPDLHDEPISKPDDIISKCFEEIFSEVKQEVIEDESSCFEVQFSDSDSDSDSIDQNLENDESSQMSESPNEEQISSIFKEVATHEEEDGKAGIYDFFSIQVDSSPVEEAIDEPVAANNEKSGVSEAGSLILEMNPQLGDVEATGDIEIADKPMIDQQESGFLQDDDANVQLKNQDSDSSQDLNITDQDETNEDFNGGDKASEDHQFDSITEGRRLSEEAFNETVLLKTEYLETNQNAATRDFVLEQELINGGDEGGKEEKEQADSVADNCKSSRAFSDESLLAETQDHPCDNNVEDKIDSEEDKAQAGKFKITSSMDLEEHSDSKMKKSALAENSDGEVDNMEVEDRTEPEAADTRLSSNNRTNSEVRTTFFPARRNTNQELVTTSNKPKGAIRRRRPVKDNEEPRSFNPREPNYLPLEPDPEAEKVDLRHQMMDERKNSEEWMLDFALRKTVTELAPARKRKVALLVEAFETVLPLPKYETRIRHTSAAFAHPRPIQACS* 970
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1504 969 MobiDBLite consensus disorder prediction 629 653 - -
Vvi7g1504 969 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 944 IPR044681 GO:0005516
Vvi7g1504 969 MobiDBLite consensus disorder prediction 525 545 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 757 802 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 1 140 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 660 682 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 94 140 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 341 478 - -
Vvi7g1504 969 SMART CaM_binding_2 828 944 IPR012417 GO:0005516
Vvi7g1504 969 MobiDBLite consensus disorder prediction 429 443 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 822 855 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 719 735 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 393 407 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 506 554 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 717 889 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 378 392 - -
Vvi7g1504 969 MobiDBLite consensus disorder prediction 444 459 - -
Vvi7g1504 969 Pfam Plant calmodulin-binding domain 843 944 IPR012417 GO:0005516
Vvi7g1504 969 MobiDBLite consensus disorder prediction 609 682 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi7g1504 Vvi-Chr7 19762668 19765577 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1504 861 969 Calmodulin-binding Proteins AT2G38800 55.963 7.62e-32 130
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1504 - - vvi:100247519 1882.84