Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1497 ATGGCATCTACAGTGTCCGTTGCCTATAATTTGTCGGCGTCCGTGCCGGACTGGTTGAATAAGGGAGACAACGCATGGCAGATGATAGCGGCCACGCTGGTGGGCCTCCAGAGCGTGCCCGGGCTGGTGATCCTGTACGGCAGCGTGGTGAAGAAGAAATGGGCGGTCAACTCGGCCTTCATGGCGCTCTACGCCTTCGCCGCGGTGGTCCTCTGCTGGGTCATCTGGGCCTACAAGATGTCTTTCGGCGACAAGCTTCTACCATTCTGGGGGAAGGGCGGGCCTGCGCTGGGCCAGAAGTACCTGCTAAAGCAATCGGCTCTGCCGGCGACCACGCATTACCATAAGGATGGGACGGTGGAAACGGCGATGGTGACGCCCTTCTATCCGATGGCGACGATGGTTTGGTTCCAGTGCGTGTTTGCGGCCATCACGGTGATTCTGCTGGCGGGGTCGCTGCTGGGGAGGATGAATATAAGGGCGTGGATGATGTTTGTGCCGCTGTGGCTCACTTTTTGCTACACTGTTGGGGCCTTCAGCTTGTGGGGTGGTGGCTTCTTGTTTCATTGGGGTGTCATGGACTACTCTGGTGGTTATGTCATTCATCTTTCCTCTGGAATTGCTGGCTTCACTACTGCCTATTGGGTGGGGCCAAGATCAACCAAGGACAGGGAGAGATTCCCCCCAAATAATGTGCTGCTGATGCTGGCGGGGGCGGGGCTGCTGTGGTTGGGATGGGCCGGGTTCAACGGAGGAGACCCTTATGCGGCTAACACTGACTCTTCCATGGCAGTCCTCAACACCAACATCTGTGCCGCCACCAGCCTCCTGGTGTGGACTTGGCTTGATGTCATCTTCTTCAAGAAGCCTTCTGTCATTGGCGCCGTTCAGGGCATGATCACTGGCCTTGTCTGCATCACTCCTGCTGCAGGACTAGTTCAAGGATGGGCGGCCATAGTCATGGGCATTCTCTCCGGCAGCGTCCCATGGTTCACCATGATGATCCTCCACAAGCGCTGGACTCTTCTCCACCACATCGACGACACTCTCGGCGTCTTCCACACCCACGCCGTCGCCGGCTACCTCGGCGGCATCCTCACCGGCATCTTCGCCGAGCCCGAGCTCTGCAGCCTCTTCCTCCCCGTCACCAACTCCCGTGGCGCCGTATACGGCGGCTCTGGCGGTATCCAGGTCCTGAAGCAGCTCGCCGGCGGAGCCTTCATCATCGGGTGGAACGCGGTGGTGACTTCCATAATATGCCTTGTGGTGAGGGTGGTGCTGCCGCTGAGGATGCCGGAGGAGGAGCTGCTGATCGGCGACGACGCCGTGCACGGCGAGGAAGCGTACGCGCTGTGGGGAGATGGGGAAAAGTATGATTCGGCAAAACATGGGCTTTATTCCGATGATACTCAGCACCAAATGCCTTCCAGTGGGACCACTCAGGTAGTTTAG 1452 0.5861 MASTVSVAYNLSASVPDWLNKGDNAWQMIAATLVGLQSVPGLVILYGSVVKKKWAVNSAFMALYAFAAVVLCWVIWAYKMSFGDKLLPFWGKGGPALGQKYLLKQSALPATTHYHKDGTVETAMVTPFYPMATMVWFQCVFAAITVILLAGSLLGRMNIRAWMMFVPLWLTFCYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTTAYWVGPRSTKDRERFPPNNVLLMLAGAGLLWLGWAGFNGGDPYAANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGILSGSVPWFTMMILHKRWTLLHHIDDTLGVFHTHAVAGYLGGILTGIFAEPELCSLFLPVTNSRGAVYGGSGGIQVLKQLAGGAFIIGWNAVVTSIICLVVRVVLPLRMPEEELLIGDDAVHGEEAYALWGDGEKYDSAKHGLYSDDTQHQMPSSGTTQVV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1497 483 PANTHER AMMONIUM TRANSPORTER MEP2 10 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi7g1497 483 FunFam Ammonium transporter 8 452 - -
Vvi7g1497 483 SUPERFAMILY Ammonium transporter 18 431 - -
Vvi7g1497 483 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vvi7g1497 483 NCBIfam ammonium transporter 23 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi7g1497 483 Gene3D Ammonium transporter AmtB like domains 2 452 IPR029020 -
Vvi7g1497 483 Pfam Ammonium Transporter Family 25 449 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1497 Vvi-Chr7 19646963 19649278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1497 131 476 Inorganic Solute Cotransporters AT2G38290 70.893 4.63e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1497 K03320 - vvi:100252515 968.763