Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1496 ATGGCATCTACAGTTCCCGTTGCCTATCAGGGCAATTTGTCGGCGTCCGTGCCGGTCTGGTTGAATAAGGGAGACAACGCATGGCAGATGATAGCGGCCACGCTGGTGGGCCTCCAGAGCGTGCCCGGGCTGGTGATCCTGTACGGCAGCGTGGTGAAGAAGAAATGGGCGGTCAACTCGGCCTTCATGGCGCTCTACGCCTTCGCCGCGGTGGTCCTCTGCTGGGTCATCTGGGCCTACAAGATGTCCTTCGGCGACAAGCTTCTACCATTCTGGGGGAAGGCCGGGCCTGCGCTGGGCCAGAAGTACCTGCTAAAGCAATCGGCTCTGCCGGCGACCACGCATTACCATAAGGATGGGACGGTGGAAACGGCGATGGCGACGCCCTTCTATCCGATGGCGACGATGGTTTGGTTCCAGTGCGTGTTTGCGGCCATCACGGTGATTCTGCTGGCGGGGTCGCTGCTGGGGAGGATGAATATAAGGGCGTGGATGATGTTTGTGCCGCTTTGGCTCACTTTTTGCTACACTGTTGGGGTCTTCAGCCTGTGGGGTGGTGGCTTCTTGTTTCATTGGGGTGTCATGGACTACTCTGGTGGTTATGTCATTCATCTCTCCTCTGGGATTGGTGGCTTCACTACTGCCTATTGGGTGGGGCCAAGATCAACGAGGGACAGAGAGAGGTTTCCCCCAAACAATGTGCTGCTGATGCTGGCAGGGGCGGGGCTGCTGTGGTTGGGATGGGCAGGGTTCAACGGAGGAGACCCTTATGCAGCTAACACCGACTCCTCCATGGCAGTTCTCAACACCAACATCTGTGCCGCCACCAGCCTCCTGGTGTGGACTTGGCTTGATGTCATCTTCTTCAAGAAGCCTTCTGTGATTGGCGCCGTTCAGGGCATGATCACTGGCCTTGTCTGCATCACTCCTGCTGCAGGACTTGTTCAAGGATGGGCGGCCATAGTCATGGGCATTCTCTCCGGCAGCGTCCCATGGTTCACCATGATGATCCTCCACAAGCGCTGGACTCTTCTCCACCACATCGACGACACTCTCGGCGTCTTCCACACCCACGCCGTCGCCGGCTACCTCGGCGGCATCCTCACCGGCGTCTTCGCCGAGCCTGAGCTCTGCAGCCTCTTCCTCCCCGTCACCAACTCCCGCGGCGCCGTATACGGCGGCTCTGGCGGTATCCAGGTCCTGAAGCAGCTCGCCGGCGGAGCCTTCATCATCGGGTGGAACGCGGTGGTGACTTCCATAATATGCCTTGTGGTGAGGGTGGTGCTGCCGCTGAGGATGCCGGAGGAGGAGCTGCTGATCGGCGACGACGCCGTGCACGGCGAGGAAGCGTACGCGCTGTGGGGAGATGGGGAAAAGTATGATTCGGCAAAACATGGGCTTTATTCCGATGATACTCAGCACCAAATGCCTTCCAGTGGGACCACTCAGGTAGTTTAG 1458 0.5892 MASTVPVAYQGNLSASVPVWLNKGDNAWQMIAATLVGLQSVPGLVILYGSVVKKKWAVNSAFMALYAFAAVVLCWVIWAYKMSFGDKLLPFWGKAGPALGQKYLLKQSALPATTHYHKDGTVETAMATPFYPMATMVWFQCVFAAITVILLAGSLLGRMNIRAWMMFVPLWLTFCYTVGVFSLWGGGFLFHWGVMDYSGGYVIHLSSGIGGFTTAYWVGPRSTRDRERFPPNNVLLMLAGAGLLWLGWAGFNGGDPYAANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGILSGSVPWFTMMILHKRWTLLHHIDDTLGVFHTHAVAGYLGGILTGVFAEPELCSLFLPVTNSRGAVYGGSGGIQVLKQLAGGAFIIGWNAVVTSIICLVVRVVLPLRMPEEELLIGDDAVHGEEAYALWGDGEKYDSAKHGLYSDDTQHQMPSSGTTQVV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1496 485 SUPERFAMILY Ammonium transporter 20 433 - -
Vvi7g1496 485 Gene3D Ammonium transporter AmtB like domains 3 454 IPR029020 -
Vvi7g1496 485 PANTHER AMMONIUM TRANSPORTER MEP2 13 462 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi7g1496 485 NCBIfam ammonium transporter 25 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vvi7g1496 485 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vvi7g1496 485 FunFam Ammonium transporter 8 454 - -
Vvi7g1496 485 Pfam Ammonium Transporter Family 27 451 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1496 Vvi-Chr7 19617026 19630347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1496 133 478 Inorganic Solute Cotransporters AT2G38290 70.317 1.57e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1496 K03320 - vvi:100256159 973.385