Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1486 ATGGTTTCCAAGCCCAACACGGAGGAAGAGATGGCTAAATTCGCCATTGTTCCGGCGCAGACGCGGCGGAAAGGGATCGGAATCCGGGCATGGCTGGTGGTGTTGGAGTCCGGGCAGTCGCATCTGGAGGAGCTCGGGAAGCACTCGGTGATGCGGCGGACTGGGCTGCCCGCGCGCGATCTTCGGGTTCTCGATCCGGTGTTGTCGTATCCATCCACGATACTCGGGAGGGAGAGGGCTATTGTGATCAACTTGGAGCACATCAAGGCCATTATCACCGCTAAGGAGGTGTTGATGGTGAATAGTAATAATCCTTTGATTGTGCAGTTTGTTGAGGATCTTCAGCATCGTGTCATGCCAAAACCGGCAATGGAAAGCCATGACAAAGAGATAGAGGATGCAGCTGATGCTAATTGGGGCTCACCCTCAGTACATGGTTTTAATGGTTCAGTAACAAATTCAAGAAAAAGGCCATCTCAAAGGGTTAATGTTTCCTCTGAAGTGCTGAATGTTGATGTGAAAGAAGACAGCCCTAAGACCTCAGAGGATGAACGAGTAGCTGCAGGACCAAAGGTGTTACCATTTGAGTTCAGAGCACTAGAAGCTTGTCTTGAATCGGCTTGCAGGTGCCTTGAGTCTGAGACACAAACACTGGAGCAAGAGGCGTATCCAGCATTGGATGAACTGACTTCTAATATCAGCACACTTAATCTTGAGCGTGTTAGACAGATAAAGAGTCGCTTAGTTGCAATATCTGGTCGGGTACAGAAGGTTAGAGATGAGCTTGAACATCTGCTTGATGATGACAATGATATGGCTGAGATGTTTTTGACAGAAAAGCTTGTTCGCCCCTCTTTGGATCAGTCATCAATAAAAGAGGAATTATGCAATGATGAACTCGAAGAAGATGATGAAAGGACTGAAGAATCCAAGTCTGAGAGTAACTCTGAAATCTTCAGTGGCTTTAAGCCCAATGTTGAGGAATTGGAGATGCTTTTGGAAGCCTACTTTGTACAAGTAGATGGCATCTTGCAGAAGCTGTCTGATATGAGCGAATATGTGGGTGACACTGAGGACTTCATCAATATCATGTTGGATGACAAACAAAATCAGCTGCTGCAAATGGGAGTGATGCTGAGTACAGCAAACATGATAATCAATGCTGGTATTGTGGTTGTGGGGTTGTTTGGAATGAACATAACTATCTCTCTTTTTGACGGTGGCCCGTCTACCAAATTCTTGGAAACTACCTTGGGTACATTAGGAAGTTGTGTAGCTCTATATTTAATTGCTTTTGTTTGGGGTAAGAAGAAAAAACTGTTGGGTTCATGA 1332 0.4565 MVSKPNTEEEMAKFAIVPAQTRRKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIVINLEHIKAIITAKEVLMVNSNNPLIVQFVEDLQHRVMPKPAMESHDKEIEDAADANWGSPSVHGFNGSVTNSRKRPSQRVNVSSEVLNVDVKEDSPKTSEDERVAAGPKVLPFEFRALEACLESACRCLESETQTLEQEAYPALDELTSNISTLNLERVRQIKSRLVAISGRVQKVRDELEHLLDDDNDMAEMFLTEKLVRPSLDQSSIKEELCNDELEEDDERTEESKSESNSEIFSGFKPNVEELEMLLEAYFVQVDGILQKLSDMSEYVGDTEDFINIMLDDKQNQLLQMGVMLSTANMIINAGIVVVGLFGMNITISLFDGGPSTKFLETTLGTLGSCVALYLIAFVWGKKKKLLGS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1486 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 19 441 IPR039204 -
Vvi7g1486 443 FunFam Magnesium transporter MRS2-F 160 372 - -
Vvi7g1486 443 MobiDBLite consensus disorder prediction 143 166 - -
Vvi7g1486 443 MobiDBLite consensus disorder prediction 137 166 - -
Vvi7g1486 443 Coils Coil 297 317 - -
Vvi7g1486 443 Gene3D Magnesium transport protein CorA, transmembrane region 109 372 - -
Vvi7g1486 443 FunFam Magnesium transporter MRS2-1 19 102 - -
Vvi7g1486 443 CDD Mrs2_Mfm1p-like 31 440 IPR039204 -
Vvi7g1486 443 Gene3D - 20 102 - -
Vvi7g1486 443 MobiDBLite consensus disorder prediction 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1486 Vvi-Chr7 19390510 19413577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1486 31 441 MRS2 Gene Family AT3G19640 52.632 3.17e-138 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1486 - - vvi:100249123 834.328