Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1477 ATGAAGGTGAAGAAGGGCTGGCTTGCGGTTGAAGTAGGGTTAGAGGAGGAGGATGGAGGCTTCCAGCGCTTCGTTATTCCCATATCCTACTTATACCATCCCCTCTTCAAGAGGCTCTTGGAGAAAGCTCAAGAGGTATACGGCTTCCACACGGCTGGGCCGCTGCGCCTCCCGTGTTCCGTCGATGATTTCCTCCATCTCCGGTGGCGGATTGAGAGGGAAAATGGCTCCCACCACAACCACCACCACCATCATCACCACCTCTCCGGTGCCTTGTCCTTCCACTCTTGTTGA 294 0.551 MKVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGPLRLPCSVDDFLHLRWRIERENGSHHNHHHHHHHLSGALSFHSC* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1477 97 Pfam Auxin responsive protein 3 70 IPR003676 GO:0009733
Vvi7g1477 97 MobiDBLite consensus disorder prediction 78 97 - -
Vvi7g1477 97 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 67 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1477 Vvi-Chr7 19210009 19210302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1477 3 72 Calmodulin-binding Proteins AT3G43120 51.429 1.00e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1477 K14488 - vvi:100259386 187.963