Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1470 ATGGCCTCCTCCCCCGCAAATCACGAAGGCTTCCACAAATTCTTCGAAAGCTGGCTCACAGAGCAAAACCAGCACCTTCAAGAGCTCATTTCTGCGTCCAGAAACAATCAGCACACTGACGATTCTGATCAAATCCTGTGCCCTCTGGTAGAACGCGTGGTCAGCCACTACCATAACTACTACCACGCCAAATCCCTCTCGACAAGGGACAACATTTTGTCTATGCTCACCCCGCCTTGGCGATCTTTATTAGAGGACGCCTTTCTCTGGGTTGGCGGGTGGAGACCGAGCGTGGCCTTCCACCTGCTCTACTCCAAGTCGGGTTTGCAGTTTGAGAGTGGACTTGCTGACCTGATCCGCGGGCTGAGCACTGGGGATTTGGGCGATATGTCTCACGAGCAGCTCTGCCGCGTGGATGAGTTGCAAAGGAAGACTATAAGAGAAGAGAGGGAGATGACAGAAAACATGGCTAGGATTCAGGAGACGGTGGCGGACTCCAAGATGGTGGAGTTGTCGGAGGCAGCCACGGAGGAGGGCGGCGGTGGAGATGATCTGGGGGAGAGAGTTGAGTCAGCGCTGAAGCATAAGGAGGAGGGGTTGGCGGAGATGCTGCTCAAGGCGGACGATCTAAGGCTGAGAACACTCAAGGGCGTCCTGGACATTCTCACTCCGATGCAGTGCGTCCATTTCTTGATAGCTGCGGCGGAGCTCCACTTGAGGCTTCATAAGTGGGGTAAGAACAAGGATGAGCAGCAGCACCACGTCTAA 768 0.5469 MASSPANHEGFHKFFESWLTEQNQHLQELISASRNNQHTDDSDQILCPLVERVVSHYHNYYHAKSLSTRDNILSMLTPPWRSLLEDAFLWVGGWRPSVAFHLLYSKSGLQFESGLADLIRGLSTGDLGDMSHEQLCRVDELQRKTIREEREMTENMARIQETVADSKMVELSEAATEEGGGGDDLGERVESALKHKEEGLAEMLLKADDLRLRTLKGVLDILTPMQCVHFLIAAAELHLRLHKWGKNKDEQQHHV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1470 255 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 10 253 - -
Vvi7g1470 255 Pfam Seed dormancy control 25 105 IPR025422 GO:0006351|GO:0043565
Vvi7g1470 255 ProSiteProfiles DOG1 domain profile. 8 251 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1470 Vvi-Chr7 19064850 19065617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1470 18 242 bZIP Transcription Factor Family AT5G06950 26.549 1.13e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1470 - - vvi:100244104 501.901