Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1465 ATGATGAGAAGCCTTTCCCCTGAGCTTTTCCACGTCTGCAGTGTTGATGGTGGCTACACAAGAAGCTTGAGAAACCAGTTTCCAAAACAGAGAAACCCCCCATTACCAATACCAGTTCTCAAAAAACGGAAACGCCTTCGATTTACACACTCTTCTTTCATTTGCTCAGCAACTCTAGCAGTGATGGCAGATGAAAAAAAGAAAGTGTTCGATGTTGAAAGTGCTGCTTCATTGGTGAAGGAGCTCAGAGGGAGCTTCAATGCTGGTAAGACAAAGAGCTATGAATGGAGAATTGCACAGTTGAAGGGAATCGAGAAGATGATTGATGAGCGGGAGAAAGATATCATTGAGGCTCTTCATGAGGATCTTTCCAAACCCGAACTTGAGGCTTTTGTGTCTGAGATTTCAATGTCAAAAGGCGCGTGTAAGTTGGCTCTCAAAGAATTGGGTCATTGGATGAAGCCAGAGAAGGCCAAAACTTCAATGACAACATATCCATCATCAGCAGAAATTGTGTCAGAACCTCTTGGTGTCGTGTTGGTCATCTCAACATGGAATTATCCTTTGTTGCTATCTATTGACCCAGTGATTGGAGCTATAGCAGCTGGCAATGCTGTAGTTCTAAAACCTTCAGAAATAGCTCCAGCAACATCGACTTTGCTTTCAAAATTATTAGAGGAATATCTAGACAACTCCTCCATACGAGTTGTTGAGGGGGCTGTGGCTGAAACAACTGCCTTATTGGAGCAGAAGTGGGACAAAATATTCTACACAGGTAGTCCAAGAGTTGGACGCATAGTAATGGCTGCGGCAGCAAAGCACCTTACACCCGTAACTTTGGAACTTGGAGGAAAGTGCCCTGTTGTTGTCGACTCCAATGTCAACTTACAAGTTGCTGCGAGGAGATTAATAGCAGGAAAGTGGGCATGCAATAACGGACAAGCTTGCATTTCTCCTGATTATATTATCACGACAAAAGATTTTGCTCCAAAGTTGATAGATGTTTTGAGACATGAGCTAGAGGAATTCTTCGGGAAAAATCCAATTGAATCAGAAGACATGTCCCGCATTGTGAGTGTACAGCACTTCAAACGCCTGACAAGGCTCTTAGATGAGGATGAGGTCTCTGATAAGATCATCATTGGTGGACAAAGTGATGAGAACCAACTAAAGATAGCTCCAACCATCTTGGTGGATGTTCCTGAAGACACTGAGATCATGAAGGAGGAGATATTCGGGCCATTACTTCCCATCCTCACTGTGGAAAATCTAGAAGAGAGTTTTGACGTGATTAACTCAAAATCAAAGCCTCTTGCTGCATATCTCTTCTCTGAAAACAAACAGCTGCAGAAGGATTTTGTGAACAACATATCTGCAGGAGGAATGCTCATCAATGACACCATTCTACATCTGACTGTTTCGAGTTTACCATTTGGAGGAGTTGGGGAGAGCGGAATGGGCTCATACCATGGCAAGTTCTCCTTTGATGCATTTAGCCACAAGAAGGCAGTTCTCTACAGGGGCTTCACTGGAGAATCACCAGCAAGGTACCCACCATACACACCTGGAAAGCTAAAACTATTGAAGACTCTGACCAGTGGCAACATAGTCTCCATTCTTCTTGCCTTGCTTGGATTCTCCAAAGATTGA 1650 0.4358 MMRSLSPELFHVCSVDGGYTRSLRNQFPKQRNPPLPIPVLKKRKRLRFTHSSFICSATLAVMADEKKKVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGIEKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTTYPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKLLEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGGKCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFFGKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDTEIMKEEIFGPLLPILTVENLEESFDVINSKSKPLAAYLFSENKQLQKDFVNNISAGGMLINDTILHLTVSSLPFGGVGESGMGSYHGKFSFDAFSHKKAVLYRGFTGESPARYPPYTPGKLKLLKTLTSGNIVSILLALLGFSKD* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1465 549 PIRSF ALDH 60 543 IPR012394 GO:0006081
Vvi7g1465 549 CDD ALDH_F3FHI 75 506 - -
Vvi7g1465 549 FunFam Aldehyde dehydrogenase 284 484 - -
Vvi7g1465 549 FunFam Aldehyde dehydrogenase 83 287 - -
Vvi7g1465 549 PANTHER ALDEHYDE DEHYDROGENASE 73 539 IPR012394 GO:0006081
Vvi7g1465 549 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 84 502 IPR016162 GO:0016491
Vvi7g1465 549 SUPERFAMILY ALDH-like 78 512 IPR016161 GO:0016491
Vvi7g1465 549 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 284 484 IPR016163 GO:0016620
Vvi7g1465 549 Pfam Aldehyde dehydrogenase family 75 504 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1465 Vvi-Chr7 18958057 18963578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1465 45 549 Aldehyde Dehydrogenase Gene Family AT4G34240 66.931 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1465 K00128 - vvi:100266331 1046.57