Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1458 ATGAAGAAACAAGGGTGCGAGATTGAAGCAATTGGGATCAACTACCAGATCTACACACATAAAGGAGAGCAGTCCTCCCCTTTTAAGATCTTCAACAAACAAGTAGTGAAAGGTGGAACATTAAGCCCAGGCGTTAGGCATGTCCTGAAGGATGTCAACTGTGAGGCCAAACCATGGGAAATTCTCGCCATTGTCGGCCCCAGTGGTGCTGGAAAATCATCTCTACTCGAGATCCTCGCCGGAAAAATTGCGCCTCAAACCGCATCCATTTGTGTGAATCAGAAGCCCATGGACAAGGCTCAGTTCAAGAAAATATCTGGGTTCGTGGCTCAGAAGGACACCCTCTTCCCCCTCCTCACCGTTGAAGAAACCCTCATGTTTAGCGCCAAGCTGAGGTTAAGGCTTCCTCCGGCACAGTTGATCTCCAAAGTGAAGTCGTTGATACAGGAACTGGGATTAGAGCATGTGGCTGGCGTTCGGGTGGGTGATGATAAGGCGCGTGGCATCTCCGGCGGAGAAAGGCGGCGAGTCTCCATCGGTGTGGATGCGGTACATGACCCCAAGGTACTGATTCTGGATGAGCCCACTTCGGGACTTGACAGTACTTCTGCGCTTCAAATCATCGATATGCTTAAGACCATGGCTGAAAGCCGGGGTCGAACCATAATTCTGAGCATACACCAACCTGGGTTTCGCATTGTGAAGCTGTTCAACTCCATTCTTCTGCTGGCTAATGGCTCGGTTTTGCACCATGGCACAGTTGAGCAGCTTGGACTGAACTTGAGGCTGATGGGATTGGAGCCTCCTCTTCATGTTAACATCGTGGAATATGCGATAGAGTCAATTGAAAACATTCAAGAACAGAAACAGCAACGGCAACAGAAACAGCAACAGCAACAGCAAGCTGTGGTCCAAGAATCAACGGCAGCGCAACTGCAGGCAATCCCACGAGGCAGAAGTGGCAACTGCACTCTTCAACAGCTATTCCAACAGTCCAAGGTTATTGATGAGGAAATAATCATCAACACAAGCATCGATTTTGCCCGAGGTTTCGCCAATTCTAGATTTCGAGAGACCATCATTTTGACACATAGGTTCTCCAAAAACATTTTCAGAACCAAGGAGCTGTTTGCATGCCGAACACTTCAAATGCTGATTGCTGGGCTTGTTCTGGGTTCAATCTTTTATCAGCTCAAAGACAACCTAATTGGAGCCGAAGAAAGGGTAGGTCTGTTTGCGTTCATTTTGACATTTTTGCTGTCTTGCACAACAGAGGCCCTACCGATCTTCTTGCAAGAGAGGGACATTTTAATGAAGGAGACCTCCAGTGGAAGCTACAGGGTCTCATCATATGCCATTGCTAATGGGCTTGTTTATCTCCCATTTCTACTCATTCTAGCCATATTGTTCTCACTGCCACTGTACTTGCTTGTGGGTCTGAACCCAAATTTCATGGCATTCATGCACTTCTTGTTTCTCATATGGTTGATTCTCTACACTGCCAATTCAGTTGTGGTTTGTTTCAGTGCTCTTGTGCCTAATTTCATAGTCGGATACTCGGTGATATCGGGGGTGATGGGTTCGTTCTTTCTCTTTTCGGGCTACTTCATATCGAAGAACGGCATGCCGGATTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTACCCATTTGAAGGGTTTCTGATAAATGAGTTCTCGGGGCCGGGAAAGTGCTTGGATTACATGTTTGGGACATGTGTTGTGAAGGGTGAAGATGTGCTGCGAGAAGAAGGATATGGAGAAGAGAGTAGATGGAGGAATGTGGTCATCATGGTGTGTTTCATATTGCTTTACAGGTTCATTTCTTATGTTATCCTCAGGTGTAGATGCTCTCAGAGGAGTCTCAAGGGCGTGCTTGTGTGA 1908 0.467 MKKQGCEIEAIGINYQIYTHKGEQSSPFKIFNKQVVKGGTLSPGVRHVLKDVNCEAKPWEILAIVGPSGAGKSSLLEILAGKIAPQTASICVNQKPMDKAQFKKISGFVAQKDTLFPLLTVEETLMFSAKLRLRLPPAQLISKVKSLIQELGLEHVAGVRVGDDKARGISGGERRRVSIGVDAVHDPKVLILDEPTSGLDSTSALQIIDMLKTMAESRGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGTVEQLGLNLRLMGLEPPLHVNIVEYAIESIENIQEQKQQRQQKQQQQQQAVVQESTAAQLQAIPRGRSGNCTLQQLFQQSKVIDEEIIINTSIDFARGFANSRFRETIILTHRFSKNIFRTKELFACRTLQMLIAGLVLGSIFYQLKDNLIGAEERVGLFAFILTFLLSCTTEALPIFLQERDILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFSLPLYLLVGLNPNFMAFMHFLFLIWLILYTANSVVVCFSALVPNFIVGYSVISGVMGSFFLFSGYFISKNGMPDYWIFMHYISLFKYPFEGFLINEFSGPGKCLDYMFGTCVVKGEDVLREEGYGEESRWRNVVIMVCFILLYRFISYVILRCRCSQRSLKGVLV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1458 635 Gene3D - 33 339 IPR027417 -
Vvi7g1458 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 616 - -
Vvi7g1458 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 258 IPR027417 -
Vvi7g1458 635 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524|GO:0016887
Vvi7g1458 635 SMART AAA_5 58 391 IPR003593 GO:0016887
Vvi7g1458 635 Pfam ABC-2 type transporter 359 567 IPR013525 GO:0016020|GO:0140359
Vvi7g1458 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 270 IPR003439 GO:0005524
Vvi7g1458 635 Pfam ABC transporter 49 197 IPR003439 GO:0005524
Vvi7g1458 635 Coils Coil 278 305 - -
Vvi7g1458 635 FunFam ABC transporter G family member 5 33 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1458 Vvi-Chr7 18781708 18783615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1458 47 288 Calmodulin-binding Proteins AT2G36910 23.529 5.29e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1458 K05681 - vvi:100250895 1189.48