Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1454 ATGTCGAAGTGGGGAAAGAGGAAGCAGAGCTACGCCTCAGACGGCGACTCCGACGACCACGCGCCGTCCAAGAAATCCTCTATGAAAGACTCCGATGACCCCGACAATATCATCGTCTGCGAGATTTCGAGGAACAGGAGGGTTTCAGTGAGGAACTGGCAAGGGAAGGTTCAGGTGGATATTCGAGAGTTCTACGTCAAAGATGGCAAGCAAATGCCTGGCAAAAAAGGTATCTCACTAACCATGGATCAGTGGAATGTTCTTCGAGATCACGTCAATGAAATTGACGAGGCAGTTGCTGACAATGCTTAG 312 0.4968 MSKWGKRKQSYASDGDSDDHAPSKKSSMKDSDDPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEIDEAVADNA* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1454 103 Gene3D Transcriptional Coactivator Pc4; Chain A 29 103 IPR009044 GO:0003677|GO:0006355
Vvi7g1454 103 MobiDBLite consensus disorder prediction 1 36 - -
Vvi7g1454 103 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 19 101 IPR045125 GO:0003713|GO:0060261
Vvi7g1454 103 MobiDBLite consensus disorder prediction 9 36 - -
Vvi7g1454 103 FunFam Putative transcriptional co-activator 30 103 - -
Vvi7g1454 103 Pfam Transcriptional Coactivator p15 (PC4) 40 91 IPR003173 GO:0003677|GO:0006355
Vvi7g1454 103 SUPERFAMILY ssDNA-binding transcriptional regulator domain 39 100 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1454 Vvi-Chr7 18689397 18700461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Vvi7g1454 PC4 7.9e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1454 K25815 - vvi:100245748 210.69