Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1432 ATGAAACCTCTAGATGATTCTCATCAACAGTCTCAATACCCTCCTCCCAAAACATCACCACATCTTGTATGTGATCAAGGTGGAGGTGAGGAGTGGGGGTGTGAAGAGAAGAGGCTGTTTGACAGTGCACAAGCGGAGCTTGATCCCAATTGTCCAGACCTATTCCAGAAGATCCAGTCGAGGGTGCCTGGAAAAACAATTGAACAGATCAAAAGGCACTACGATCTTGTTAATAGTCCGGTGGAGGAGAACTTGCACCACCCTCCTCAGCAGCCGCCCAGGAACCGGAGGGTGAGTAGGGAGAAACCGCCCATATCTGACCCAGATCCATGCCTTCCACAATGCGGGCCTTGGACTTGGCGAGAGCACGAGTTGTTTCTGATGGGGCTGATCAGGAATGGCAGCGGTGACTGGAAGAGAATATCTAGAGATTTTGTATATACAAGAACAGCGAAGCAAGTGGGTCACCATGCCCAGGCGTACTTAAAGCGCCCCTATCGCTTAGGTGATAGGATAAGAAGCCGTGAATTGGCTGCCAGCAGAATCAGGACATCTCAGCCTGCGGACGCTGTGAAGTCTGCACCATCCTCGAGCGTGCTGGTGTCGACAGTACTGCCTGAGATTCTGATGGACGGCAAGTGTTCGGGAGGGAGCAGTAAGGGGAAAGCGATAGTCCACCAACCTCCGCCGCCGACGGCATTGGAGCTGTTTCCGGCGACACACGTTAGTGCAGCTTCCGCTCCATCTCGACCTTCTGTGGGGAGTTTCATCATGGGCCTCCCTGCGGGGGGTGGGGCTTCCACCTATGCAAGGAGATTTGGTGGTCATCCCGCTCTTGGCTTGCCCATTGGCATCCCTGCTGGGCCTTTCACTTCTGTTGCTCGGGCTTCTGCTGGTTTTTCTTCCGGTGAGCTGTTGCTTGGCTTGCCCATTGGTTCACCAAGCGTCCCTGCCGGAGCTTCTACAGCTGCTGGTTTTTCTGTGGGTGAGGACCTCTCCCCTGGCTTGCCCACTGGTTCTTCCAGCGACAGTGATTTCACCATTGGAGTCCCTGCAGCTGGGCCTTCCCCTTCTTTTGCTCGGGCTTCTGCTAGTTTTCCTTGGGGCGAGCTTTCCCTTGGCTTGCCTAGTGCCTCGGCCACGATCGATGGTGATTTCATCATCGGCCTCCCTGTCTGCAGTTCCACCCAAACTCGGAGTCATGCTGCTTCACCTCCAGTGGGAGAGCTCTCACTTGGCTGGCCCGTTGGATCTTCAATGAATGGAGTTATCACCCTGGGCCTCCCTGCATCTGGAACTTCCATAGGAGTTCGGACTTCTGTTGCCGTTTCTGGGGATGAGCTCACCAATGGAAATTCCGGCGGCCAAGATTCCATGATGGGTAGACCTGTTCTTAGCACTTCTAGAGTGGGTAGGGCGGCTGGTTTCCATATGGGTGCGCCTATTGTCTCTTCAAGTGATTCTCGAACTTCTAATGCTTTTAGTACAGAAGGTATGGCAGTCGGCTGGTCGGTTGTAACCTATCTTAACTTTGAAACCTTTGGTGCTTTTTCCCTGGACGGTCTCATTCTTGGTTTGCCTCTTGACACCTTCATCAACAATCAGACTGCTGTTACTCCTCCTCCTCCCTATGGTTTCACTGTCGGTCTGCCAGTAGGCTCTTCAATGAATACTCACAATTCTAGGATTTTTTCTCCAACAGACTTCACAGTTGGATTTCCCGTGAGCACTTTCCCTAATACTCAAGCTTTTAGGGTTTCCTCCCCAAGTGGCTTCACTGTTGGCTGGCCTGCTAGGATTCCTCCATCTCATCCAATTAGTAATTTCACAATTGGCACCCCTATTGGTTATTGGATCAATCCTCAAACTAGGGCTTTTTCATTAGATCATTTCGTCATTGGCATACCTGTCACCACTGTCAATTTTCAAACTTTTGGTGCTTCTCCAAGTGTTTTTAGTTGTGGTTTCCCAATTTCAGATTCCATGAGTACTTGTACTTCTCAACCTTATCGGGCTTCTTCTCCATCGACTGATGACTCCACCATTGGACTACCCGTTGAGGAGTATTTCACCATGGCCTTGCCTGTGAGTCCTCCCATCAATCAACAAACTCTTGGTGCTTCTTCTCCGAATATTATTACCACTGGCGTGCCAATTAGCACGTCCCCCAATACTCATACTTCTAGTACTGCTTCCTCTCTGGGTGACTTGGCCATTGGGCTGGCTATTGACACTCCCATCCATGCTCAAATTTCTGAGGACCCTTCTTCATCGTCACTTCCCGATCTTGATATGAGCTGA 2301 0.5098 MKPLDDSHQQSQYPPPKTSPHLVCDQGGGEEWGCEEKRLFDSAQAELDPNCPDLFQKIQSRVPGKTIEQIKRHYDLVNSPVEENLHHPPQQPPRNRRVSREKPPISDPDPCLPQCGPWTWREHELFLMGLIRNGSGDWKRISRDFVYTRTAKQVGHHAQAYLKRPYRLGDRIRSRELAASRIRTSQPADAVKSAPSSSVLVSTVLPEILMDGKCSGGSSKGKAIVHQPPPPTALELFPATHVSAASAPSRPSVGSFIMGLPAGGGASTYARRFGGHPALGLPIGIPAGPFTSVARASAGFSSGELLLGLPIGSPSVPAGASTAAGFSVGEDLSPGLPTGSSSDSDFTIGVPAAGPSPSFARASASFPWGELSLGLPSASATIDGDFIIGLPVCSSTQTRSHAASPPVGELSLGWPVGSSMNGVITLGLPASGTSIGVRTSVAVSGDELTNGNSGGQDSMMGRPVLSTSRVGRAAGFHMGAPIVSSSDSRTSNAFSTEGMAVGWSVVTYLNFETFGAFSLDGLILGLPLDTFINNQTAVTPPPPYGFTVGLPVGSSMNTHNSRIFSPTDFTVGFPVSTFPNTQAFRVSSPSGFTVGWPARIPPSHPISNFTIGTPIGYWINPQTRAFSLDHFVIGIPVTTVNFQTFGASPSVFSCGFPISDSMSTCTSQPYRASSPSTDDSTIGLPVEEYFTMALPVSPPINQQTLGASSPNIITTGVPISTSPNTHTSSTASSLGDLAIGLAIDTPIHAQISEDPSSSSLPDLDMS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1432 766 CDD SANT 117 162 IPR001005 -
Vvi7g1432 766 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 166 IPR017930 -
Vvi7g1432 766 MobiDBLite consensus disorder prediction 1 17 - -
Vvi7g1432 766 Gene3D - 29 78 - -
Vvi7g1432 766 SMART sant 28 80 IPR001005 -
Vvi7g1432 766 SMART sant 114 164 IPR001005 -
Vvi7g1432 766 ProSiteProfiles Myb-like domain profile. 116 162 IPR001005 -
Vvi7g1432 766 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 29 167 IPR043363 -
Vvi7g1432 766 MobiDBLite consensus disorder prediction 80 111 - -
Vvi7g1432 766 MobiDBLite consensus disorder prediction 1 28 - -
Vvi7g1432 766 Pfam Myb-like DNA-binding domain 116 162 IPR001005 -
Vvi7g1432 766 SUPERFAMILY Homeodomain-like 115 167 IPR009057 -
Vvi7g1432 766 Gene3D - 116 168 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vvi7g1432 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1432 - - vvi:104879931 1462.2