Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1387 ATGCTCAACCAAGGCTTGTTTGAGGATCAAGAGATGCCCTCACAACTGGGTTTCTATTCTTTTCATCCCAACTTGAGTTTTCCACAAGTTGGTTGCCAACAATCCCTAAAAGCCTTCAACATACCCCCTTCACTTGCAGCTGATGCTCCTTCTTCTCTCACTGAAGCCCTCCTCTCTTCTGCACCAACAAAGCAAAGAGAAGACATCACTCCTCATTTGGGAGGAGCCCAACTCCTCTCCTTGCAAAGATCAACTGCAAATCTCTGGGCTTGGGGAGAGGTGAATGAGTGCTTGAGCAGCAAGAGAAGTATCGGTGGAGATGACCACCTGGGTGTCTCTGCAATGAAGATGAAGAAGATAAAAGCCAGAAGAAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGTGAGGTGGATGTTCTTGATGACGGTTACAAATGGAGAAAGTATGGCCAGAAAGTTGTAAAAAATACCCAGCATCCCAGGAGTTACTATCGTTGTACACAAGACAATTGTCGCGTAAAGAAACGAGTCGAGCGACTAGCGGAGGATCCAAGGATGGTGATAACGACGTATGAAGGTCGACACATTCATTCGCCCTCCCACGATTTAGAAGAGTCGCAAGCTCCATCCCATCTCAATAATTTCTTTTGGTAG 660 0.4636 MLNQGLFEDQEMPSQLGFYSFHPNLSFPQVGCQQSLKAFNIPPSLAADAPSSLTEALLSSAPTKQREDITPHLGGAQLLSLQRSTANLWAWGEVNECLSSKRSIGGDDHLGVSAMKMKKIKARRKVREPRFCFKTMSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHSPSHDLEESQAPSHLNNFFW* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1387 219 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1387 219 MobiDBLite consensus disorder prediction 200 219 - -
Vvi7g1387 219 FunFam WRKY transcription factor 57 128 202 - -
Vvi7g1387 219 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 203 IPR044810 GO:0003700
Vvi7g1387 219 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1387 219 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1387 219 SUPERFAMILY WRKY DNA-binding domain 134 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1387 219 Gene3D WRKY domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1387 Vvi-Chr7 17958487 17960674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1387 38 219 WRKY Transcription Factor Family AT4G39410 50.424 9.53e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi7g1387 WRKY 7.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1387 - - vvi:100247547 447.973