Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1375 ATGCCCCAACCCTTTCAAAGTACTATCCCATCACCTGCCATGGACTTCCCACCACCCCTAAACCCTAATCACATCTTCATCAACTCCTCCTTTGCTCCCTCCTCCTCGGAGTTTGAACCCTCCGACTACCTCCTCCTCGACGATGCATCCGATGAGGCGGCGGCGCCGGTGGCAGTGACGGGCGGCTCTTCCATTGGTGCAACTCCAATGATGAACACTACTACTAACATGGAATGTAAAGATGGGGCGAAGAGAAAGAAGACGGATTTGGGGTTTAGGGTTGCCTTCAAGACGAAATCGGATTTGGAGATCATGGATGATGGGTTTAAGTGGAGGAAGTATGGGAAGAAATCAGTGAAGAACAGCCCCAATCCAAGGAACTACTACAAATGTGCAAGTGGAGGATGCAATGTGAAGAAGAGGGTCGAAAGGGATAGGGAAGACTCAAGCTATGTGATAACCACATACGAGGGAGTCCACAACCATGAAAGCCCTTGTGTGGTGTACTACGACCAGGTTCCTTTGATGGTTTCTTCTAATGCTTGGACTTTGCAAGCTTCTTCTCAATCTTCTTCTTCATGA 582 0.488 MPQPFQSTIPSPAMDFPPPLNPNHIFINSSFAPSSSEFEPSDYLLLDDASDEAAAPVAVTGGSSIGATPMMNTTTNMECKDGAKRKKTDLGFRVAFKTKSDLEIMDDGFKWRKYGKKSVKNSPNPRNYYKCASGGCNVKKRVERDREDSSYVITTYEGVHNHESPCVVYYDQVPLMVSSNAWTLQASSQSSSS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1375 193 ProSiteProfiles WRKY domain profile. 100 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1375 193 SUPERFAMILY WRKY DNA-binding domain 98 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1375 193 FunFam WRKY transcription factor 57 91 165 - -
Vvi7g1375 193 Gene3D WRKY domain 92 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1375 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 175 IPR044810 GO:0003700
Vvi7g1375 193 SMART WRKY_cls 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1375 193 Pfam WRKY DNA -binding domain 106 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1375 Vvi-Chr7 17794649 17797203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1375 60 186 WRKY Transcription Factor Family AT5G64810 55.906 1.63e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi7g1375 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1375 - - vvi:100266268 370.163