Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1372 ATGGCTTTAGTGAGCTACCCTGAAATCCTCGTGGCAGTCATTTTCTTTCTCTTTATTGGTGGATTCTGCAGCAAAAAAGGAGTGCCATGGAACTGGCCCATTGTGGGAATGTTTGCAGGCCTCCTCTTCCACGTCCACCGCATCCATGATGAGGCTGCTGAGATTCTCGAGAAAACTGGGTGTACTTTTCTATTCAAAGGGCCTTGGTTCTGTAACATGGACATGCTAGGCACCACTGATCCGGCCAATGTGCACTACATTATGAGCAGTAATTTCTCTAATTTTCCAAAAGGGACTGAGTTCAGGAAAATGTTTGAAGTTTTGGGTGATGGGATTTTCAATGCGGATGGGGAGTCGTGGCGGAACCAGAGAAAACTTGGTCAATCGATGATCAATAATCCGCGGTTCCACCGGTTTCTGGCGAAAGTCACCTACAATAAAGTGGAGAAAGGGCTTGTTCCGCTTCTTGATCATCTGTCGGAGCAAGGCAGAGTGGTGGATTTGCAGGACGTGTTCCAAAGGCTCACGTTTGATACCACCTGCATGTTGGTGACCGGCTTCGACACCAAATGCCTCTCCATTGAATTCCCTGAAGTTCCGTTCGCGACGGCCCTGGAAGACGTTGAGGAAGCTGTATTTTATCGCCATGCTTTGCCTGAAACCCTTTGGAGACTACTAAGGTGGCTAGGGATCGGAAAAGAGAAGAAACTCCGGAAAGGCTGGAAAACCCTGGATCATACTATAGCTGAATACATATCAATGAAACGAGAAGAACTAAGCAAAGGAATCACCAAATTGCGAGAAGATGAAGATGGTGCCGATCTGTTAACCTCGTATATGACTGAAGATAACGCCATAGGGTTGAAATGTGACGGTAAGTTTCTCAGAGACACCATTCTAAATTTCATGATCGCAGGACGGGACACTACTAGTTCAGCCCTCACCTGGTTTTTCTGGCTTGTTTCCAAGAACCCATTAGTAGAATCCAAGATCAGAGAAGAAATCGAAACGGCTATACCCGAAAAAGAGGATAGAAAAGGACGACACATATTCAAGACAGAAGGGTTAAACAAGCTGGTTTATCTGCATGCCGCAATGTGTGAAGCTTTAAGGCTCTACCCACCTGTCCCATTCCAGCACAAGGCCCCAATTCAACCAGACGTCCTCCCAAGTGGCCATAAGGTTGATCCAAAGATGAAGATCTTCTTTCCCGTGTATGCAATGGGCAGAATGACTGCAATATGGGGAAAAGACTGCTTAGAATTCAAACCGGAGAGGTGGATTTCAGAGCTAGGAAAGATCAAGCATGAGCCTTCCTACAAGTTCTTTTCATTCAACGCTGGTCCGAGGACTTGTATAGGGAAGGAGGTGGCTTTCACTCAAATGAAGGCGGTGGCCGCCACGATAATCCACAACTACCATGTTGAGATGGTGAAAGGTCACCATGTGGCCCCTAACGTTTCCATTATTCTGTACATGAAGCGTGGGTTCAAGGTCAGAGTTAGCAAGAGATGGGGTGGGTAG 1524 0.4672 MALVSYPEILVAVIFFLFIGGFCSKKGVPWNWPIVGMFAGLLFHVHRIHDEAAEILEKTGCTFLFKGPWFCNMDMLGTTDPANVHYIMSSNFSNFPKGTEFRKMFEVLGDGIFNADGESWRNQRKLGQSMINNPRFHRFLAKVTYNKVEKGLVPLLDHLSEQGRVVDLQDVFQRLTFDTTCMLVTGFDTKCLSIEFPEVPFATALEDVEEAVFYRHALPETLWRLLRWLGIGKEKKLRKGWKTLDHTIAEYISMKREELSKGITKLREDEDGADLLTSYMTEDNAIGLKCDGKFLRDTILNFMIAGRDTTSSALTWFFWLVSKNPLVESKIREEIETAIPEKEDRKGRHIFKTEGLNKLVYLHAAMCEALRLYPPVPFQHKAPIQPDVLPSGHKVDPKMKIFFPVYAMGRMTAIWGKDCLEFKPERWISELGKIKHEPSYKFFSFNAGPRTCIGKEVAFTQMKAVAATIIHNYHVEMVKGHHVAPNVSIILYMKRGFKVRVSKRWGG* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1372 507 CDD CYP86A 63 497 - -
Vvi7g1372 507 SUPERFAMILY Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 Gene3D Cytochrome P450 25 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PANTHER CYTOCHROME P450 19 499 - -
Vvi7g1372 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1372 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1372 Vvi-Chr7 17779131 17780654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1372 1 504 Cytochrome P450 AT4G39490 55.405 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1372 - - vvi:100266173 1051.58