Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1371 ATGGCTTTACTGGGCTACCCTGAAATCCTCTTGGCAGTCATTTTCTTTATCATTCTTGGTAGATTCTGGAACATAAATGATCTGCCATGGAACTGGCCCCTTCTTGGAATGTTTCCGAGCGTCTTCCTTCACCTCCACCGCATCCACGATAGGGTTACCGATATTCTAGAGAAAAGTGGGTGCACTTTTCTAGTCAAAGGACCTTGGTTCTGTAACATGGATCTTCTAGTCACCACTGATCCTGCCAATGTGCACTACATTATGAGCAGTCACTTCTCGAATTTCCCAAAAGGGTCTGAGTTCAGCAAGATTTTTGATTTTTTGGGCGATGGGATTTTCAATTCCGACGCCGAGTCATGGCGTAAACAAAGAAAACTCGGTCAACTGATGATCAACAATGTGCGGTTGTACCGGTTTCTTGGGAAAATCACCCAGAATAAAGTGGAGAAAGGGCTTCTTCCAATACTTGATTATCTGTCGGAACAAGAAGACCGAGCGATGGACTTGCAGGACGTGTTCCAAAGGCTTACTTTTGATACCACATGCATGTTGGTGACCGGCTTCGACTCCAAATGCCTCTCCATTGAATTACCTGAAGTTCCATTTGCCACAGCCTTGGAAGATGCTGAAGAAGCTATACTTCATCGTCATGTCTTGCCTGAAACCCTTTGGAGACTACAAAGGTGGCTAGGGATTGGAAAAGAGAAGAAACACCAAAAAGCTTGGGAAACCCTAGATCATACTATAGCTGAATATATATCAAAGAAACGAGACGAATTAAGTAAAGGAATAATCAACTTGCAAGAAGAGGAAGATGGTGTCGATCTGTTAACGTCGTATATGAGTGAAGATATCACCATGGGGTTGAAATGCGACCATAAATTTCTTAGAGACACCATTCTAAATTTCATGATCGCGGGACGGGACACTACCAGTTCAGCTCTCACCTGGTTTTTCTGGCTTGTTTCCAAGAACCCATTAGTAGAATCCAAGATCAGAGAAGAACTCGAATCAGCTATACCCGAAAAAGAGGATAAAAAAGGACGACACACATTCAAGACAGAAGCGCTAAACAAGCTGGTTTATCTGCATGCCGCATTGTGTGAAACATTAAGGCTCTACCCACCTGTTCCATTCCAACACAAGGCCCCTCTCCAACCGGACATGCTCCCAAGTGGGCATAGGGTTGATCCAAAGATGAAGATATTGTTTTCTTTGTATGCAATGGGCAGAATGACTTCCATATGGGGTACAGACTGCTTAGAATTCAAGCCAGAGAGGTGGATTTCAGAGAGAGGAAGGATCAAGCATGAACCCTCATACAAGTTCTTCGCATTCAATGCTGGTCCGAGGACTTGTCTAGGGAAGGAGGTAGCTTTCACTCAAATGAAGGCAGTCGCGGCCACGATAATCCATAACTACCATGTTCAGGTGGTGGAAGGAGAGAGGAGAGAGGAGAGAGGAGAGAGGGTGAGAGAGAGGAGAGAGGAGAGAGGGTGA 1500 0.4487 MALLGYPEILLAVIFFIILGRFWNINDLPWNWPLLGMFPSVFLHLHRIHDRVTDILEKSGCTFLVKGPWFCNMDLLVTTDPANVHYIMSSHFSNFPKGSEFSKIFDFLGDGIFNSDAESWRKQRKLGQLMINNVRLYRFLGKITQNKVEKGLLPILDYLSEQEDRAMDLQDVFQRLTFDTTCMLVTGFDSKCLSIELPEVPFATALEDAEEAILHRHVLPETLWRLQRWLGIGKEKKHQKAWETLDHTIAEYISKKRDELSKGIINLQEEEDGVDLLTSYMSEDITMGLKCDHKFLRDTILNFMIAGRDTTSSALTWFFWLVSKNPLVESKIREELESAIPEKEDKKGRHTFKTEALNKLVYLHAALCETLRLYPPVPFQHKAPLQPDMLPSGHRVDPKMKILFSLYAMGRMTSIWGTDCLEFKPERWISERGRIKHEPSYKFFAFNAGPRTCLGKEVAFTQMKAVAATIIHNYHVQVVEGERREERGERVRERREERG* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1371 499 SUPERFAMILY Cytochrome P450 29 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 CDD CYP86A 63 477 - -
Vvi7g1371 499 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PANTHER CYTOCHROME P450 22 482 - -
Vvi7g1371 499 Gene3D Cytochrome P450 27 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 Pfam Cytochrome P450 31 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1371 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1371 Vvi-Chr7 17764334 17769272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1371 1 485 Cytochrome P450 AT4G39490 54.400 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1371 - - vvi:100250831 984.941