Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1370 ATGGCTTCAATTGGCTACCCTGAAATCCTCTTGGCAGTCATTTGCTTTCTCCTCCTTCATCGACTAAGCAACAGCAACATGCTTCCCTGGAACTGGCCACTTGTTGGAATGCTTCCATGGATTTTTCGCAACATTCAGCAGATTCAGGACAGATGTACTGAAGTTCTAGAGCAAAGCAGCGGCACTTTCCTACTGAAAGGACCTTGGTTTGCTAACATGGACATGCTGATCACCAGTGATCCTGCCAACGTGCATTATATAATGAGCACTAATTTCTCTAATTTTCCCAAGGGGCCTGAGTTCTTGAAGATTTTTGATGTTTTGGGAGAGGGGATTTTCAATTCTGACTCGGATTTATGGAGGAAACAAAGAAAACTGGCTCAAGTGTTGATCAATGACCGGCAGTTCCAGCAGTTCCTGGTGAAGACTACCGAGAATAAGGTGGATGAAGGACTAATTCCAGTTCTTGAGCATGTGTCCAAGCAGGGTCTGTTGGTGGACTTGCAAGATTTGTTCCAGAGGTTTACATTTGATACCACCTGCAAATTGATCACTGGCTTCGACACCAAATGTCTCTCCATTGAATTCCCAAGAGTCCTATTCGCAAAGGCCATGGATGATGTTGAAGAAGCCATATTTTTCCGGCATGTTGTACCTGAAAGTCTCTGGAAATTACAAAGGTGGCTGGGGATTGGAGAAGAGAAGAAGTTAAGCAAAGGTTGGGAAACCATAGATAATGTTATAGCTGAATATATATCAATGAAACATGAAGAACTAAGCAAAGGAATTGCCAAATTGCAAGAAGATGAAGAGGGCACCGATCTTTTAACATCATACATGAATGAAGACAGTACCATGGAGTTGAAATCCAATAAGTTTTTGAGAGACACCATTGTGAATTTCCTGCTCGCAGGGCGAGACACTACTAGTGCAGCTCTCACCTGGTTTTTCTGGCTTGTTTCAAAGAATCCATTAGTGGAAGCCAAGATTAGAGAAGAACTCAAAGAAACCATACCAGAGAAAGATCAGAAATGGCATATCTTCAGAACAGAAGAGCTAAATAAACTAGTATATCTCCATGGTGCGTTGTGTGAAACATTAAGGCTCTACCCACCTGTTCCATTCCAGCACAAAGCCCCTCATCAAGCAGATGTCCTACCGAGTGGCCACAGGGTTCATCCAAAGATGAAGATCTTATTTTCCTTGTATGCAATGGGCAGAATGACAACAATATGGGGAAAAGATTGCTTTGAGTTCAAGCCAGAGAGATGGATCACAGAGCAAGGAGGTATTAAGTATGAGCCATCTTACAAGTTCTTTGCATTCAATGCCGGTCCAAGGACTTGTCTAGGGAAGGGGGTAGCTTTCACTCAAATGAAGGCAGTTGCAGCTGCTATAATCCATAATTACAATGTTCAACTGGTGCAAGGTCATCCTGTGGCTCCTAATGTTTCAATTATTCTTCACATGAAGCATGAATTAATGGTTAGAGTTACCAAGAGATGGTGA 1509 0.4254 MASIGYPEILLAVICFLLLHRLSNSNMLPWNWPLVGMLPWIFRNIQQIQDRCTEVLEQSSGTFLLKGPWFANMDMLITSDPANVHYIMSTNFSNFPKGPEFLKIFDVLGEGIFNSDSDLWRKQRKLAQVLINDRQFQQFLVKTTENKVDEGLIPVLEHVSKQGLLVDLQDLFQRFTFDTTCKLITGFDTKCLSIEFPRVLFAKAMDDVEEAIFFRHVVPESLWKLQRWLGIGEEKKLSKGWETIDNVIAEYISMKHEELSKGIAKLQEDEEGTDLLTSYMNEDSTMELKSNKFLRDTIVNFLLAGRDTTSAALTWFFWLVSKNPLVEAKIREELKETIPEKDQKWHIFRTEELNKLVYLHGALCETLRLYPPVPFQHKAPHQADVLPSGHRVHPKMKILFSLYAMGRMTTIWGKDCFEFKPERWITEQGGIKYEPSYKFFAFNAGPRTCLGKGVAFTQMKAVAAAIIHNYNVQLVQGHPVAPNVSIILHMKHELMVRVTKRW* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1370 502 SUPERFAMILY Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vvi7g1370 502 CDD CYP86A 63 494 - -
Vvi7g1370 502 PANTHER CYTOCHROME P450 22 494 - -
Vvi7g1370 502 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 Pfam Cytochrome P450 30 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1370 502 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1370 Vvi-Chr7 17759232 17760740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1370 1 501 Cytochrome P450 AT4G39490 54.440 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1370 - - vvi:100260973 1031.55