Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi7g1368 | ATGGACTTAGCCACGAAGCTTCAGTGCATTGATCTCCGGTCAAGCTTCTTCACCGGCTCGGCCCTTCTCGATGCTCGGAAAACCGGTTTGCGTCCTCATTTCCGTCCACATACCCGGTCGATTCCGATTTCTGCATCCACACATTCCATAACAGGTAGTAATAGTTCAATCAAGACAAGTGCTTTATTCAATTCCAGAACCAGGAGCTCTATGGTCTCTTCGAAAGCAGTGGCGATGGATACGTCGGTGGCCGAGACCATGAGTCGGGAGGATATTGAGTCGTTGTTTTCGAACAATTCGGTGGATGAGGCTTATCAGAAACGTGTGAATAAGCAATCGAACAGTGGCGCCTCGAGTATTTCATCGGGTGTTAGGTTAGAGAATGTGAGTAAGGGCTATAAGGGTGTCACTGTATTGAAAGATGTGAGTTGGGAAGTGAAGAAGGGTGAAAAAGTGGGTTTGGTGGGTGTTAATGGTGCAGGAAAGACGACCCAGTTGAGAATTATCACGGGTCTGGAAGAACCCGATTCGGGGAACGTAATTAAGGCGAAAATGAATATGAAAATCGCATTTTTGAGTCAAGAGTTCGAGGTTTCATTGAGTAGGACGGTGAAGGAAGAGTTTATGAGTGCGTTTAAGGAGGAGATGGAGATAGCAGCAAGGTTGGAGAAGGTCCAGAAGGCGATTGAGAGTTCAGTGGATGATTTGGAGTTGATGGGGAGGCTGTTGGATGAGAATGATTTGCTTCAGAGGCGAGCACAAGCTGTTGACCTGGATGAGGTTGATGCGAAGATCAGTAAGTTGATGCCAGAGCTTGGGTTTGCCCCCGAAGATTCAGATAGGTTGGTTGCCTCATTTAGTAGTGGGTGGCAGATGAGAATGTCCCTAGGGAAGATTTTACTTCAGGAGCCAGATTTATTACTATTGGATGAGCCCACAAATCACCTTGATCTTGACACAATTGAATGGCTTGAAGGTTATCTTAACAAGCAGGATGTGCCCATGGTGATCATATCTCATGACAGAGCTTTCCTTGATCAGTTGTGTACAAAAATTGTGGAAACCGATATGGGTGTATCCAGGACATATGAAGGAAATTATTCTCAGTATGTGATTGCAAAGGCAACATGGATTGAAGCTCAATATGCAGCATGGGAAAAGCAGCAGAAGGAAATTGAACATACAAGAGACTTAATAAGCAGGCTAAGTGGCGGAGCAAATTCTGGCCGTGCATCCACTGCTGAAAAGAAACTTGAAAAACTTCAAGATGAGGAACAGATTGATAAGCCATTTCAACATAAACAAATGAAGATCAGATTTCCTGAGCGTGGAGTGAGTGGAAGATCTGTTTTAGCAATTAAGAATCTGGAATTTGGCTATGGGGATAAGGTACTATTTAAAAAGGCAAACCTTACAATTGAAAGGGGAGAAAAAATTGCAATTATTGGCCCAAACGGGTGTGGAAAGAGTACTTTGCTTAAACTGATTATGGGCCTAGAGAAGCCTATAGGAGGTGAAGTGCTGCTTGGCGAGCATAATGTCTTACCAAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGATTTGGATAAAACAGTGTTGCAAACTGTAGAAGACGTTGCAGAGAATTGGAAAATTGACGATATAAAGGGACTACTTGGGCGTTGTAATTTCAAAGCCGATATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGAGAAGGCACGTCTTGCCTTCTGCAAGTTCATGGTAAAACCTTCAACTTTGCTAGTATTGGATGAACCAACCAATCACTTGGATATACCTACTAAAGAGATGCTTGAGGAGGCAATAACGGAGTACAAGGGCACTGTTGTTACAGTGTCTCATGATCGATACTTCATAAAGCAAATAGTTAATAGAGTAATTGAAGTTAAGGATGGGAATTTACAAGACTATGCAGGAGATTACAATTATTATCTGGAGAAGAACCTCGATGCAAGAGCAAGAGAGCTTGAACGCGAGGCAGAGCTTGATGAGAAGGCCCCTAAAGTAAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAGGAAGCCATGAAGAAACAGAAAAGGCAGGCATTTCAGGCTGCAAAAGCAAAATCCAAAGGGCTGAAGAATGCAAAGAGATGGAATTGA | 2157 | 0.4335 | MDLATKLQCIDLRSSFFTGSALLDARKTGLRPHFRPHTRSIPISASTHSITGSNSSIKTSALFNSRTRSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKRVNKQSNSGASSISSGVRLENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIITGLEEPDSGNVIKAKMNMKIAFLSQEFEVSLSRTVKEEFMSAFKEEMEIAARLEKVQKAIESSVDDLELMGRLLDENDLLQRRAQAVDLDEVDAKISKLMPELGFAPEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVIAKATWIEAQYAAWEKQQKEIEHTRDLISRLSGGANSGRASTAEKKLEKLQDEEQIDKPFQHKQMKIRFPERGVSGRSVLAIKNLEFGYGDKVLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPIGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLQTVEDVAENWKIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPTKEMLEEAITEYKGTVVTVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLEKNLDARARELEREAELDEKAPKVKAKSKMSKAEKEAMKKQKRQAFQAAKAKSKGLKNAKRWN* | 719 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi7g1368 | 718 | Coils | Coil | 656 | 676 | - | - | |
Vvi7g1368 | 718 | FunFam | ABC transporter ATP-binding protein | 411 | 680 | - | - | |
Vvi7g1368 | 718 | Pfam | ABC transporter | 353 | 440 | IPR032781 | - | |
Vvi7g1368 | 718 | Gene3D | - | 119 | 406 | IPR027417 | - | |
Vvi7g1368 | 718 | ProSitePatterns | ABC transporters family signature. | 286 | 300 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi7g1368 | 718 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 124 | 382 | IPR003439 | GO:0005524 | |
Vvi7g1368 | 718 | PANTHER | ABC TRANSPORTER ATP-BINDING SUBUNIT | 123 | 709 | - | - | |
Vvi7g1368 | 718 | ProSitePatterns | ABC transporters family signature. | 570 | 584 | IPR017871 | GO:0005524|GO:0016887 | |
Vvi7g1368 | 718 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 432 | 658 | IPR027417 | - | |
Vvi7g1368 | 718 | CDD | ABCF_EF-3 | 451 | 642 | - | - | |
Vvi7g1368 | 718 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 451 | 666 | IPR003439 | GO:0005524 | |
Vvi7g1368 | 718 | CDD | ABCF_EF-3 | 124 | 354 | - | - | |
Vvi7g1368 | 718 | Pfam | ABC transporter | 139 | 314 | IPR003439 | GO:0005524 | |
Vvi7g1368 | 718 | MobiDBLite | consensus disorder prediction | 670 | 718 | - | - | |
Vvi7g1368 | 718 | Pfam | ABC transporter | 467 | 598 | IPR003439 | GO:0005524 | |
Vvi7g1368 | 718 | Coils | Coil | 678 | 698 | - | - | |
Vvi7g1368 | 718 | MobiDBLite | consensus disorder prediction | 670 | 698 | - | - | |
Vvi7g1368 | 718 | SMART | AAA_5 | 148 | 358 | IPR003593 | GO:0016887 | |
Vvi7g1368 | 718 | SMART | AAA_5 | 475 | 643 | IPR003593 | GO:0016887 | |
Vvi7g1368 | 718 | FunFam | Putative ABC transporter ATP-binding component | 123 | 409 | - | - | |
Vvi7g1368 | 718 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 125 | 367 | IPR027417 | - | |
Vvi7g1368 | 718 | Gene3D | - | 413 | 683 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi7g1368 | Vvi-Chr7 | 17739635 | 17745271 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi7g1368 | 448 | 668 | Calmodulin-binding Proteins | AT2G36910 | 24.696 | 3.14e-11 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi7g1368 | - | - | vvi:100250725 | 1319.29 |