Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1368 ATGGACTTAGCCACGAAGCTTCAGTGCATTGATCTCCGGTCAAGCTTCTTCACCGGCTCGGCCCTTCTCGATGCTCGGAAAACCGGTTTGCGTCCTCATTTCCGTCCACATACCCGGTCGATTCCGATTTCTGCATCCACACATTCCATAACAGGTAGTAATAGTTCAATCAAGACAAGTGCTTTATTCAATTCCAGAACCAGGAGCTCTATGGTCTCTTCGAAAGCAGTGGCGATGGATACGTCGGTGGCCGAGACCATGAGTCGGGAGGATATTGAGTCGTTGTTTTCGAACAATTCGGTGGATGAGGCTTATCAGAAACGTGTGAATAAGCAATCGAACAGTGGCGCCTCGAGTATTTCATCGGGTGTTAGGTTAGAGAATGTGAGTAAGGGCTATAAGGGTGTCACTGTATTGAAAGATGTGAGTTGGGAAGTGAAGAAGGGTGAAAAAGTGGGTTTGGTGGGTGTTAATGGTGCAGGAAAGACGACCCAGTTGAGAATTATCACGGGTCTGGAAGAACCCGATTCGGGGAACGTAATTAAGGCGAAAATGAATATGAAAATCGCATTTTTGAGTCAAGAGTTCGAGGTTTCATTGAGTAGGACGGTGAAGGAAGAGTTTATGAGTGCGTTTAAGGAGGAGATGGAGATAGCAGCAAGGTTGGAGAAGGTCCAGAAGGCGATTGAGAGTTCAGTGGATGATTTGGAGTTGATGGGGAGGCTGTTGGATGAGAATGATTTGCTTCAGAGGCGAGCACAAGCTGTTGACCTGGATGAGGTTGATGCGAAGATCAGTAAGTTGATGCCAGAGCTTGGGTTTGCCCCCGAAGATTCAGATAGGTTGGTTGCCTCATTTAGTAGTGGGTGGCAGATGAGAATGTCCCTAGGGAAGATTTTACTTCAGGAGCCAGATTTATTACTATTGGATGAGCCCACAAATCACCTTGATCTTGACACAATTGAATGGCTTGAAGGTTATCTTAACAAGCAGGATGTGCCCATGGTGATCATATCTCATGACAGAGCTTTCCTTGATCAGTTGTGTACAAAAATTGTGGAAACCGATATGGGTGTATCCAGGACATATGAAGGAAATTATTCTCAGTATGTGATTGCAAAGGCAACATGGATTGAAGCTCAATATGCAGCATGGGAAAAGCAGCAGAAGGAAATTGAACATACAAGAGACTTAATAAGCAGGCTAAGTGGCGGAGCAAATTCTGGCCGTGCATCCACTGCTGAAAAGAAACTTGAAAAACTTCAAGATGAGGAACAGATTGATAAGCCATTTCAACATAAACAAATGAAGATCAGATTTCCTGAGCGTGGAGTGAGTGGAAGATCTGTTTTAGCAATTAAGAATCTGGAATTTGGCTATGGGGATAAGGTACTATTTAAAAAGGCAAACCTTACAATTGAAAGGGGAGAAAAAATTGCAATTATTGGCCCAAACGGGTGTGGAAAGAGTACTTTGCTTAAACTGATTATGGGCCTAGAGAAGCCTATAGGAGGTGAAGTGCTGCTTGGCGAGCATAATGTCTTACCAAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGATTTGGATAAAACAGTGTTGCAAACTGTAGAAGACGTTGCAGAGAATTGGAAAATTGACGATATAAAGGGACTACTTGGGCGTTGTAATTTCAAAGCCGATATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGAGAAGGCACGTCTTGCCTTCTGCAAGTTCATGGTAAAACCTTCAACTTTGCTAGTATTGGATGAACCAACCAATCACTTGGATATACCTACTAAAGAGATGCTTGAGGAGGCAATAACGGAGTACAAGGGCACTGTTGTTACAGTGTCTCATGATCGATACTTCATAAAGCAAATAGTTAATAGAGTAATTGAAGTTAAGGATGGGAATTTACAAGACTATGCAGGAGATTACAATTATTATCTGGAGAAGAACCTCGATGCAAGAGCAAGAGAGCTTGAACGCGAGGCAGAGCTTGATGAGAAGGCCCCTAAAGTAAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAGGAAGCCATGAAGAAACAGAAAAGGCAGGCATTTCAGGCTGCAAAAGCAAAATCCAAAGGGCTGAAGAATGCAAAGAGATGGAATTGA 2157 0.4335 MDLATKLQCIDLRSSFFTGSALLDARKTGLRPHFRPHTRSIPISASTHSITGSNSSIKTSALFNSRTRSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKRVNKQSNSGASSISSGVRLENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIITGLEEPDSGNVIKAKMNMKIAFLSQEFEVSLSRTVKEEFMSAFKEEMEIAARLEKVQKAIESSVDDLELMGRLLDENDLLQRRAQAVDLDEVDAKISKLMPELGFAPEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVIAKATWIEAQYAAWEKQQKEIEHTRDLISRLSGGANSGRASTAEKKLEKLQDEEQIDKPFQHKQMKIRFPERGVSGRSVLAIKNLEFGYGDKVLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPIGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLQTVEDVAENWKIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPTKEMLEEAITEYKGTVVTVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLEKNLDARARELEREAELDEKAPKVKAKSKMSKAEKEAMKKQKRQAFQAAKAKSKGLKNAKRWN* 719
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1368 718 Coils Coil 656 676 - -
Vvi7g1368 718 FunFam ABC transporter ATP-binding protein 411 680 - -
Vvi7g1368 718 Pfam ABC transporter 353 440 IPR032781 -
Vvi7g1368 718 Gene3D - 119 406 IPR027417 -
Vvi7g1368 718 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524|GO:0016887
Vvi7g1368 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 124 382 IPR003439 GO:0005524
Vvi7g1368 718 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 123 709 - -
Vvi7g1368 718 ProSitePatterns ABC transporters family signature. 570 584 IPR017871 GO:0005524|GO:0016887
Vvi7g1368 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 658 IPR027417 -
Vvi7g1368 718 CDD ABCF_EF-3 451 642 - -
Vvi7g1368 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 451 666 IPR003439 GO:0005524
Vvi7g1368 718 CDD ABCF_EF-3 124 354 - -
Vvi7g1368 718 Pfam ABC transporter 139 314 IPR003439 GO:0005524
Vvi7g1368 718 MobiDBLite consensus disorder prediction 670 718 - -
Vvi7g1368 718 Pfam ABC transporter 467 598 IPR003439 GO:0005524
Vvi7g1368 718 Coils Coil 678 698 - -
Vvi7g1368 718 MobiDBLite consensus disorder prediction 670 698 - -
Vvi7g1368 718 SMART AAA_5 148 358 IPR003593 GO:0016887
Vvi7g1368 718 SMART AAA_5 475 643 IPR003593 GO:0016887
Vvi7g1368 718 FunFam Putative ABC transporter ATP-binding component 123 409 - -
Vvi7g1368 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 367 IPR027417 -
Vvi7g1368 718 Gene3D - 413 683 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi7g1368 Vvi-Chr7 17739635 17745271 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1368 448 668 Calmodulin-binding Proteins AT2G36910 24.696 3.14e-11 65.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1368 - - vvi:100250725 1319.29