Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1360 ATGGAGTTGGGTTTGGTTTCCAAGGATACCAACTGGTGGGTGTTCACACTCCCTGCTTTTCTTGGATCCGGAAACTTACTTGATGGGTATGTTTTGGGGTCTTTGTTAATTGCTTTTGCCTGTGCTTCGCTTTTTGCCTGGGGTTTTGCTGTTGGTGGGATCGCCTGGAAGAATAGGAGGAATGAAAGAGGGCGTGTTTCTATTCCTGGGGCTCGAGGTCTTCCTATCTTTGGAAGCTTGCTCACTCTCACTCGCGGGTTGGCTCACCGCTCGCTGGCTTCTATGGCTGTCAGTAGAGGTGCTACCCAGCTGATGGCTTTCAGCCTTGGTTCCACTCCGGTTGTGGTAGCTTCTGACCCTCACACCGCCCGTGAAATCCTGGCCTCCCCTCACTTTGCCGATCGTCCGATCAAACAGTCGGCGAAGAGCCTCATGTTTAGCCGCGCCATTGGGTTTGCTCCAAATGGTGCCCACTGGCGGCTCCTTAGAAGAATTGCGTCGTCCCACCTCTTTGCGCCCAAGCGCATCGCAGCCCATGAAGCTGGCCGACAGCTAGACTGCGCCGCCATGCTGTGCAGCATAGCCGATGAGCAGGCCCTGCATGGGGCAGTGTGTTTAAGGAAGCATCTTCAGGCGGCGGCTCTCAACAACATCATGGGTAGCGTGTTTGGTAAGAGGTACGATCCGACGCATGATAGCAACGAACTCAATGAGCTGAGAGCCATGGTCAAAGAAGGGTTCGAGCTTCTTGGTGCTTTCAACTGGTCGGATTATCTTCCATGGCTGAGCTACTTCTACGACCCGTTTCGTATCAATGAACGTTGCTCCAAACTCGTTCCCCGAGTCAGAAAACTCGTCCGAGGCATCATCCAGGAACACCGACTCGGTGAGTCCAGCAGGCTGTCTGATAATTCTGATTTCGTCGACGTTCTCCTCTCTTTGGACGGTGAAGAGAAGCTTCATGAAGACGACATGGTTGCTGTGTTATGGGAAATGATATTCCGAGGCACTGATACGACCGCACTGTTAACCGAGTGGGTCATGGCCGAACTGGTGTTGCACCCTGAGGTACAAACCAAGCTTCAGACCGAACTGGACATGATGGTGATGAACAAGAGCGTGACAGACGCTGACGTGGCCAAACTGCCCTACTTGCAGGCTGTAGTGAAGGAGGCTCTTAGGGTCCATCCACCGGGCCCACTCCTTTCCTGGGCCAGGCTGTCCACATCAGATGTCCAGCTCAGCAACGGCATGCTCGTCCCCACTAACACAACCGCCATGGTCAACATGTGGGCCATCACCCACGACCCCAAAATCTGGCCCAACCCGTCGGAGTTCAACCCGGAGAGGTTCCTCGAGAGCGCGGGCGGGGCTGACGTGGACGTGAGAGGTAGCGACCTGAGGCTGGCTCCTTTCGGAGCTGGTCGGAGGGTGTGCCCAGGGAAGAACCTGGGTCTTGTCACCGTGAGCCTGTGGGTGGCCAAGCTGGTGCACCATTTTAGGTGGATCCAAGACGTGGCTCACCCAGTGGACCTGACCGAGGTGTTGAAACTCTCATGTGAGATGAAGAGTCCTCTGCATGCTGTTGCTGTTAGAAGAAATGGTAGTGCTTTAGAATAG 1620 0.5469 MELGLVSKDTNWWVFTLPAFLGSGNLLDGYVLGSLLIAFACASLFAWGFAVGGIAWKNRRNERGRVSIPGARGLPIFGSLLTLTRGLAHRSLASMAVSRGATQLMAFSLGSTPVVVASDPHTAREILASPHFADRPIKQSAKSLMFSRAIGFAPNGAHWRLLRRIASSHLFAPKRIAAHEAGRQLDCAAMLCSIADEQALHGAVCLRKHLQAAALNNIMGSVFGKRYDPTHDSNELNELRAMVKEGFELLGAFNWSDYLPWLSYFYDPFRINERCSKLVPRVRKLVRGIIQEHRLGESSRLSDNSDFVDVLLSLDGEEKLHEDDMVAVLWEMIFRGTDTTALLTEWVMAELVLHPEVQTKLQTELDMMVMNKSVTDADVAKLPYLQAVVKEALRVHPPGPLLSWARLSTSDVQLSNGMLVPTNTTAMVNMWAITHDPKIWPNPSEFNPERFLESAGGADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVSLWVAKLVHHFRWIQDVAHPVDLTEVLKLSCEMKSPLHAVAVRRNGSALE* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1360 539 FunFam Cytochrome P450 78A5 60 533 - -
Vvi7g1360 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vvi7g1360 539 Gene3D Cytochrome P450 57 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PANTHER CYTOCHROME P450 78A7-RELATED 9 533 - -
Vvi7g1360 539 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 CDD CYP78 100 526 - -
Vvi7g1360 539 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 SUPERFAMILY Cytochrome P450 68 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1360 539 Pfam Cytochrome P450 69 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1360 Vvi-Chr7 17664056 17665759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1360 1 529 Cytochrome P450 AT5G09970 69.476 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1360 K20619 - vvi:100257640 1085.48