Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1341 ATGGATTGGTCATGGATTGCACTTTCACTGATTGCTCTTGCTTATGTTGTTCGAGCATTGCTAAACATAAGCAAGAACAAGCATAAGAGATTGCCTCCTGGTCCAAGAGGGATCCCCATTTTGGGAAACCTTCATATGCTAGGTGAGTTGCCTCACCAGGATCTCCTTCGACTCGCCAAGAAGTATGGCCCCATCATGTACATGCGCTTTGCCCTGGTGCCCACCATTGTGGTCTCATCCCCTCAAGCAGCTGAGCAGTTCCTCAAGACGAATGATCTTGTTTTTGCTGGAAGGCCACCTCATGAAGGTTCAAGAATTGTATCCTACGACCGAAAAGGCATATCCTTTACAGACTATGGTCCTTATTGGCGCAACATGCGCAAGTTATGCACCTTGGGACTACTTAGCAATCTCAGAATCAGTTCTTTCCAGCCCCTGAGAAGAGAAGAGCTTGACCTCTTGATCAAGTCCCTTAAAGAGGCTGCCCTTGCTCGCACTGCTGTTGATCTCAGCGCCAAGATTTCATCCCTCAGTGCAGACATGAGTTGCAGGATGATTTTTGGGAAGAAGTACATGGACAAGGATATCGACGAGAGAGGGTTCAAAGCTGTGATTCAAGAGGGTATGCAATTAGCTGGAGCTCCTAACATTGGTGATTACATTCCTTTTGTGGCGCCCCTTGACCTTCAGGGGCTGGCTCGGCGCATGAAGGCTATTAGCAAGGTGTTTGATGCTTTTTTTGAGAAGATCATTGATGATCATATTCATGAACCAAAGGAAGAAGGGCAGCCAAAGGACTTAATAGATGTGATGCTAGGCTATATGGGATCCAAAGAAAACGAGTTCCAAATTGAAAGGTCTAATATCAAAGCCCTAGTTTTGGACATGCTAGCAGGATCTATGGACACTTCAGCCACAGCAATTGAGTGGGCACTTGCAGAACTGCTCAAGAACCCAAGAATAATGAAGAAAGTCCAAGAAGAACTGGAAAAAGTAGTGGGCATGGAGAGGAAGGTGGAGGAATCAGACCTAGAGAGCTTGGAGTACTTGGACATGGTTGTGAAGGAAACCTTGAGGCTCCACCCAGTGGCTCCTCTACTCATCCCTCATGAGTCCTTGGAGGACTGCACAGTCAATGGCTTCCACATCCCTCAAAAGTCCCGAGTCATGGTAAACACATATGCCATAGGGCGAGACCCTAATGTATGGACTGACGCAGAGAAGTTCCTCCCTGAGAGGTTCATCGGAAGCAGTATAGATCTCCGTGGACGTGACTTCCAACTCATCCCATTTGGCTCAGGCAGAAGAGGGTGCCCCGGGATGCAATTAGGCCTAACCGTGGTTCGACTGGTGCTGGCTCAGCTGGTCCATTGCTTTGATTGGGAGCTCCCAAATGGGATGATGCCTTCTGAGTTGGACATGACCGAGGAGTTTGGCCTCACAGTGCCGAGAGCCAAGCATATTCTGGCCGTTCCCACTTATCGCCTTCCCAACTGA 1497 0.4843 MDWSWIALSLIALAYVVRALLNISKNKHKRLPPGPRGIPILGNLHMLGELPHQDLLRLAKKYGPIMYMRFALVPTIVVSSPQAAEQFLKTNDLVFAGRPPHEGSRIVSYDRKGISFTDYGPYWRNMRKLCTLGLLSNLRISSFQPLRREELDLLIKSLKEAALARTAVDLSAKISSLSADMSCRMIFGKKYMDKDIDERGFKAVIQEGMQLAGAPNIGDYIPFVAPLDLQGLARRMKAISKVFDAFFEKIIDDHIHEPKEEGQPKDLIDVMLGYMGSKENEFQIERSNIKALVLDMLAGSMDTSATAIEWALAELLKNPRIMKKVQEELEKVVGMERKVEESDLESLEYLDMVVKETLRLHPVAPLLIPHESLEDCTVNGFHIPQKSRVMVNTYAIGRDPNVWTDAEKFLPERFIGSSIDLRGRDFQLIPFGSGRRGCPGMQLGLTVVRLVLAQLVHCFDWELPNGMMPSELDMTEEFGLTVPRAKHILAVPTYRLPN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1341 498 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 Gene3D Cytochrome P450 18 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vvi7g1341 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 Pfam Cytochrome P450 32 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1341 498 CDD CYP71-like 61 487 - -
Vvi7g1341 498 PANTHER CYTOCHROME P450 93A3-LIKE 7 496 - -
Vvi7g1341 498 FunFam Cytochrome P450 83B1 19 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1341 Vvi-Chr7 17462925 17464565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1341 5 493 Cytochrome P450 AT3G26300 41.165 4.55e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1341 K20562 - vvi:100264547 983.015