Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1340 ATGGCTTGGATATGGACTGCACTTGCCCTGATTGCCATTGTTTTTCTCTTCAACATGATGAAAAACAAGCATAAGAGGCTGCCTCCTGGCCCTAGAGGGATCCCAATTTTGGGCAATATGCATATGTTAGGGAGCTTGCCTCACCGAGCTCTACAAGCTCTATCCAAAAAGTATGGCCCCATCATGTACATGCGGTTAGGCTTTGTGCCCGCCATTGTTGTTTCTTCCCCTCAGGCTGCCGAGCAGTTCCTGAAGACACATGACCTTGTTTTCGCTAATAGGCCACCCCATGAGTGTTCAAGGCACATGCTATATGATGGAAAGGGCATATCGTTTTCTGGGTATGGCCCTTATTGGCGCAGCATGCGCAAGCTGTGCACCTTGGAGTTGCTCACCAGCCGTAAGATTAACTCCTTCAAGCCTATGAGAAGGGAAGAGGTTGGCCTGTTGATCAAGTCTTTTGAGGAAGCTGCGCGAGCTGGTGCTGCAGTTGATGTCAGTGCCAAGGTTGCGTTGCTGAGTGCAGACATGAGTTGTAGGATGGTATTTGGGAAGAAGTACATGGACAAGGATCTTGATGAAAGGGGATTCAAGGCTGTGATTCAAGAGGCAATGCAGTTGGCTGCTACTCCTAATATTGGTGATTACATTCCTTGCCTTCTGGGGCTTGATCTTCAGGGTCTGACAAGGCGGATAAAGGCAACGGGTAAGGTGTTTGATGACTTCTTTGAGAAGATCATTGATGAGCATATTCATAAGCCTAAGGAGGAAGGACAGACAAAGGACTTGGTCGATGTGATGCTGGACTTAATGGGATCTGAAGAGACTGAATACAACATCCAACGGGCCAACATCAAAGCTATATCTTTGGATATGATGGCAGCCTCCATGGACACTTCAGCAACCATGATTGAGTGGGCACTTTCAGAACTCATCAAGCATCCACCGATGATGAAAAAAGTTATAAATGAGTTGGAAAAAGTGGTGGGCATGGAGAGAATGGTGGAGGAATCAGACTTAGAGAGCTTGGAGTACCTGAACATGGTTGTGAAGGAGACCTTGAGGCTCCACCCAGTGGCACCTCTACTGATCCCTCATGAGTCCATGGAAGACTGCACAGTTGATGGCTTCCATATACCCCAAAAATCTCGTGTAATAGTGAATGTATGGGCGATAGGGCGCGACCCCAATGCATGGACTGATGCAGACAAGTTCCTGCCAGAGAGGTTTATGGAGAGCGATATAGATTTTCGGGGGCAGCACTTTCAATTTATCCCGTTTGGCTCTGGTAGAAGAGGTTGCCCCGGGATGCAATTAGGCCTCACCGTGGTTCGGCTCGTGCTGGCGCAACTTGTTCATTGCTTTGATTGGGAACTTCCAGATAACATGTTGCCAAGTGAGTTGGACATGACTGAGGAGTTTGGCCTCACATTACCAAGGGCCAAGCATCTAGTGGCTATTCCTACTTGTCGCCTTCACAAATGA 1485 0.4801 MAWIWTALALIAIVFLFNMMKNKHKRLPPGPRGIPILGNMHMLGSLPHRALQALSKKYGPIMYMRLGFVPAIVVSSPQAAEQFLKTHDLVFANRPPHECSRHMLYDGKGISFSGYGPYWRSMRKLCTLELLTSRKINSFKPMRREEVGLLIKSFEEAARAGAAVDVSAKVALLSADMSCRMVFGKKYMDKDLDERGFKAVIQEAMQLAATPNIGDYIPCLLGLDLQGLTRRIKATGKVFDDFFEKIIDEHIHKPKEEGQTKDLVDVMLDLMGSEETEYNIQRANIKAISLDMMAASMDTSATMIEWALSELIKHPPMMKKVINELEKVVGMERMVEESDLESLEYLNMVVKETLRLHPVAPLLIPHESMEDCTVDGFHIPQKSRVIVNVWAIGRDPNAWTDADKFLPERFMESDIDFRGQHFQFIPFGSGRRGCPGMQLGLTVVRLVLAQLVHCFDWELPDNMLPSELDMTEEFGLTLPRAKHLVAIPTCRLHK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1340 494 SUPERFAMILY Cytochrome P450 28 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Vvi7g1340 494 FunFam Cytochrome P450 83B1 15 487 - -
Vvi7g1340 494 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 PANTHER CYTOCHROME P450 93A3-LIKE 5 493 - -
Vvi7g1340 494 Pfam Cytochrome P450 28 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1340 494 CDD CYP71-like 57 484 - -
Vvi7g1340 494 Gene3D Cytochrome P450 14 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1340 Vvi-Chr7 17459947 17461502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1340 3 489 Cytochrome P450 AT3G26300 40.771 1.72e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1340 K20562 - vvi:100259314 969.918