Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1339 ATGGCCCTTATTGGCGCAGCATGCACCTTGGAGTTGCTCAGCAGCCATAAGATTAACTCCTTCAAGCCTATGAGAAGGGAAGAGGTTGGCCTGTTTATCAAGTCTTTTGAGGAAGCCGCGCGAGCTGGTGCTGCAGTTGATGTCAGTGCCAAGGTTGCGTTGCTGAGTGCAGACATGAGTTGTAGGATGGTATTTGGGAAGAAGTACATGGACAAGGATCTTGATGAAAGGGGATTCAAGGCTATGTTTCAAGAGGTAATGCAGCTGGCTGCTACTCCTAATATTGGTGATTACATTCCTTGCCTTCTGGGGCTTGACCTTCAGGGTCTGACACGGCGGACAAAGGCAACGGGTAAGGTGTTTGATGACTTCTTTGAGAAGATCATTGATGAACATATTCACAATCCTAAGGAGGAAGGACAGACAAAGGACTTGGTCGATGTGATGCTGGTCTTAATGGGATCTGAAGGAACTGGATACAATATCGAACGGGCTAGCATCAAAGCCATATCTTTCGATATGCTGGCAGGCTCCATGGAGACTTCATCATCCTCCATCGATTGGGCAGTTGCAGAGCTCATCAGGCATCCCCGAGTAATGAAGAAAGTCCAAAGTGAGTTGGAAAAAGTGGTGGGCATGGAGAGGATGGTGGAGGAATCAGACTTGGAGAGCTTGGAGTACTTGAACATGGTTGTGAAGGAGACCTTGAGGCTCTACCCAGCGGGGCCATTGTTGGTCCCTCATGAGTCCATGGAAGACTGCACAGTCAACGGCTTCTACATACCCCAAAAGTCCCGCATCATAGTGAATGCATGGGCGATAGGGCGGGACCCTGATTCATGGACTAATGCAGACGAGTTCCTCCCTGAGAGATTTATCGAAGGCGATATAGATTTTCGGGGAAAGCACTTCCAGTATATCTCATTTGGGTCCGGTAGAAGAGGGTGCCCTGGGATGGAATTAGGCATCACTGTGGTTCGATTCGTGGTGGCACAACTTGTGCATTGCTTTGATTGGGAACTTCCAGATGGGATGTTGCCTAGTGAGTTGAACATGACTGAGGAGTTTGGCCTCGCAATACCAAGAGCCAAGCATCTAGTGGCTATTCCTACTTATCGCCTTCGCCAATAA 1131 0.4872 MALIGAACTLELLSSHKINSFKPMRREEVGLFIKSFEEAARAGAAVDVSAKVALLSADMSCRMVFGKKYMDKDLDERGFKAMFQEVMQLAATPNIGDYIPCLLGLDLQGLTRRTKATGKVFDDFFEKIIDEHIHNPKEEGQTKDLVDVMLVLMGSEGTGYNIERASIKAISFDMLAGSMETSSSSIDWAVAELIRHPRVMKKVQSELEKVVGMERMVEESDLESLEYLNMVVKETLRLYPAGPLLVPHESMEDCTVNGFYIPQKSRIIVNAWAIGRDPDSWTNADEFLPERFIEGDIDFRGKHFQYISFGSGRRGCPGMELGITVVRFVVAQLVHCFDWELPDGMLPSELNMTEEFGLAIPRAKHLVAIPTYRLRQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1339 376 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 309 318 IPR017972 GO:0005506|GO:0016705
Vvi7g1339 376 PANTHER CYTOCHROME P450 93A3-LIKE 7 375 - -
Vvi7g1339 376 FunFam Uncharacterized protein 35 369 - -
Vvi7g1339 376 Gene3D Cytochrome P450 7 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS P450 superfamily signature 177 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS P450 superfamily signature 230 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 166 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 270 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 316 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 186 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 CDD CYP71-like 8 366 - -
Vvi7g1339 376 Pfam Cytochrome P450 11 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi7g1339 376 SUPERFAMILY Cytochrome P450 11 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1339 Vvi-Chr7 17453658 17454863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1339 3 374 Cytochrome P450 AT5G07990 40.157 6.19e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1339 K20562 - vvi:100259314 634.795