Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1334 ATGGGCATATACGAGCCACTCCACCAGATTAGCACGTGGGGAGAAAGCTTCAAAACTAATGGTTGTCCAAATACATCAGCATCCACAATTGCAGAGTTGGAAGCCAAACTAGACAATCAGTCAGAGGACACTTCACATGGAACACCTGGACCTTCTGATAAGTATGACCAAGAAGCTACTAAGCCTGTTGATAAGGTACAAAGACGTCTTGCACAAAACCGTGAGGCTGCTCGTAAAAGCCGTCTGAGGAAAAAGGCCTATGTTCAGGAGTTAGAATCTAGTAGGGTGAAACTGATGCAATTAGAGCAAGAACTCGAGCGTGCTAGACAACAGGGATTGTATATAGGTGGTGGGTTAGATGCTGGTCATCTAGGGTTCTCTGGAGCTGTAAACTCAGGAATTGCTGCATTTGAGATGGAGTATGGTCATTGGGTAGAAGAACAAAGTAGTCAGATCTGTGAGCTGAGAACTGCTTTGCATGCTCATATAAGTGATGTAGAGCTCCGGATACTGGTGGAGACTGCCATGAACCACTATTTCAATCTTTTCCGCATGAAAGCTAATGCTGCAAAGGCTGACGTGTTCTACATGATGTCTGGCATGTGGAAAACATCAGCTGAACGATTTTTCTTATGGATTGGAGGGTTTCGCCCTTCTGAGCTTCTAAAGGTTCTTGTTCCACAGCTGGACCCGTTAACAGACCAACAAATTTTGGATGTTTGTAACCTTCGACAATCTTGTCAACAAGCCGAAGATGCTCTTACACAAGGAATGGAGAAACTCCAACAAATTCTGGCTGAGGCTGTTGCAGCTGGTCAACTGGGCGAAGGAAGCTACATCCCCCAACTGGCTACTGCTCTGGAGAAATTGGAAGCTGTGGTGAGCTTCGTGAATCAGGCGGACCATCTTCGTCAGGAAACTCTGCAGCAGATGGTACGCATCCTAACAGTCCGTCAAGCAGCTCGGGGCCTGCTTGCCCTGGGGGAGTACTTCCAGCGTCTTCGAGCCTTGAGTTCACTCTGGGCTACCCGTCCTCGTGAGCCTGCCTAG 1050 0.4771 MGIYEPLHQISTWGESFKTNGCPNTSASTIAELEAKLDNQSEDTSHGTPGPSDKYDQEATKPVDKVQRRLAQNREAARKSRLRKKAYVQELESSRVKLMQLEQELERARQQGLYIGGGLDAGHLGFSGAVNSGIAAFEMEYGHWVEEQSSQICELRTALHAHISDVELRILVETAMNHYFNLFRMKANAAKADVFYMMSGMWKTSAERFFLWIGGFRPSELLKVLVPQLDPLTDQQILDVCNLRQSCQQAEDALTQGMEKLQQILAEAVAAGQLGEGSYIPQLATALEKLEAVVSFVNQADHLRQETLQQMVRILTVRQAARGLLALGEYFQRLRALSSLWATRPREPA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1334 349 Gene3D - 64 113 - -
Vvi7g1334 349 MobiDBLite consensus disorder prediction 14 63 - -
Vvi7g1334 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Vvi7g1334 349 Pfam Seed dormancy control 151 226 IPR025422 GO:0006351|GO:0043565
Vvi7g1334 349 Coils Coil 84 111 - -
Vvi7g1334 349 ProSiteProfiles DOG1 domain profile. 134 344 IPR025422 GO:0006351|GO:0043565
Vvi7g1334 349 Pfam bZIP transcription factor 64 100 IPR004827 GO:0003700|GO:0006355
Vvi7g1334 349 MobiDBLite consensus disorder prediction 14 35 - -
Vvi7g1334 349 SMART brlzneu 61 121 IPR004827 GO:0003700|GO:0006355
Vvi7g1334 349 Coils Coil 247 267 - -
Vvi7g1334 349 CDD bZIP_HBP1b-like 65 117 - -
Vvi7g1334 349 FunFam BZIP family transcription factor 64 113 - -
Vvi7g1334 349 PANTHER TRANSCRIPTION FACTOR TGA9 1 347 - -
Vvi7g1334 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 63 107 IPR004827 GO:0003700|GO:0006355
Vvi7g1334 349 SUPERFAMILY Leucine zipper domain 65 107 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1334 Vvi-Chr7 17405045 17410332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1334 1 349 Calmodulin-binding Proteins AT5G65210 74.648 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi7g1334 DOG1 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1334 K14431 - vvi:100249156 674.855