Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1316 ATGGCGATCTCTGCACTAACTGTAGCAACTGTCAAACCCCAAACCCTTCAAACCCACCATCCTAAACCCTCTCTCTCCTTCAAACCCATCGCTAATTGCATTTCTTCAACAAAGAGACCAGTATTGGATGTGGGTATTGGGCTTTTGGCAGCTTCAGTGGTGGCTTTGTCTCCATTGGAGGCAACTGCCACAAGAATCGAGTACTACGCCACTGTAGGAGAGCCCAATTGTGAGCTCAACTTTGCAAAGTCCGGGCTGGGTTACTGTGATGTTGCAGTGGGATCTGGTGAGGAGGCTCCTTTTGGTGAGCTTATCAATGTTCACTACACTGCAAGATTTGCTGACGGGACAGTCTTTGATAGCAGCTACAAACGTGCCAGACCTCTCACTATGCGAATTGGTGCTGGAAAGTTGATTAAGGGACTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCAATGTTAGTAGGTGGAAAGCGGAAGCTTCGGATTCCTCCAGCGTTAGCATATGGGCCAGAACCTGCAGGCTGCTTTTCTGGTGACTGCAATATACCTGCCAACGCTACTCTTCTTTATGATATTAATTTTGTTGGCATCTATTCGGGAAATGCGAAGTGA 621 0.4767 MAISALTVATVKPQTLQTHHPKPSLSFKPIANCISSTKRPVLDVGIGLLAASVVALSPLEATATRIEYYATVGEPNCELNFAKSGLGYCDVAVGSGEEAPFGELINVHYTARFADGTVFDSSYKRARPLTMRIGAGKLIKGLDQGILGGEGVPPMLVGGKRKLRIPPALAYGPEPAGCFSGDCNIPANATLLYDINFVGIYSGNAK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1316 206 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 201 IPR001179 GO:0003755
Vvi7g1316 206 FunFam Peptidylprolyl isomerase 74 200 - -
Vvi7g1316 206 SUPERFAMILY FKBP-like 81 200 - -
Vvi7g1316 206 Gene3D - 74 200 IPR046357 GO:0003755
Vvi7g1316 206 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 11 206 IPR044183 GO:0009507
Vvi7g1316 206 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 99 196 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1316 Vvi-Chr7 17258863 17261212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1316 83 202 Calmodulin-binding Proteins AT3G25230 39.344 4.92e-14 68.2