Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1296 ATGCAAGAAGGGAAGAGCAATAACATGAACTTGTATGAAGTCCTATGTATTAGAAGTGATGTGGGGGTTGATGAGATAAAGAAGGCATACAGGAGAATGGCTCTTCAGTGCCACCCTGATGTTTATCTCGATCCCACCACAAAGCAAGAGTCCACCAGAAGGTTCATGGAGGTCAGGAAGGCTTATGAGATGCTTTCGGATCCGATTTTGCGAAACATGTGTGATTTTGAGATGGGTCTAGTTGGATCAGTTTGTGGGGAGGAGAGGAGGCTGAGTCTCAACAAGAAAGTAAAAAGGAAGAAGGAACTGAATGCCGTAAACCACTCAAGAGATCACAAGAAATTTCTCTTCCCCATTTCCCCATCAGAGAAAGAAGAGAGATGTGTTTTAATTTGGGGTACAAACCCAAGAAAAGAAAGCATGTTGGCAAGAAGGGAAGAAGTGTCAATGGAGAGGAGGAAAGCAAGGGATTGTTACTCAAGGAGGTAG 489 0.4376 MQEGKSNNMNLYEVLCIRSDVGVDEIKKAYRRMALQCHPDVYLDPTTKQESTRRFMEVRKAYEMLSDPILRNMCDFEMGLVGSVCGEERRLSLNKKVKRKKELNAVNHSRDHKKFLFPISPSEKEERCVLIWGTNPRKESMLARREEVSMERRKARDCYSRR* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1296 162 ProSiteProfiles dnaJ domain profile. 10 78 IPR001623 -
Vvi7g1296 162 PRINTS DnaJ domain signature 12 30 IPR001623 -
Vvi7g1296 162 PRINTS DnaJ domain signature 30 45 IPR001623 -
Vvi7g1296 162 PRINTS DnaJ domain signature 152 162 IPR001623 -
Vvi7g1296 162 PRINTS DnaJ domain signature 50 70 IPR001623 -
Vvi7g1296 162 SMART dnaj_3 9 70 IPR001623 -
Vvi7g1296 162 Pfam DnaJ domain 10 75 IPR001623 -
Vvi7g1296 162 CDD DnaJ 10 67 IPR001623 -
Vvi7g1296 162 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 4 102 - -
Vvi7g1296 162 Gene3D DnaJ domain 1 102 IPR036869 -
Vvi7g1296 162 SUPERFAMILY Chaperone J-domain 4 72 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1296 Vvi-Chr7 17128135 17129591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1296 12 75 C2H2 Transcription Factor Family AT1G74250 45.455 6.78e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1296 - - vvi:100853926 199.904