Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1245 ATGGACTCTTCAGCCATGCCCAAACCCTTTTCCGGCCACCATGGCTGGTATTCCTCCATGCTTTCTTCCGTATCAGATGCTTCTACACCCACCGGCGCCGCCGTCACCCCGTCCACTACTGCCAAGCTTATCTATACTTACAGTAATTCCATAAATGGCTTCAGTGCAAGTCTCACTCTTTCTGAGCTTGAGGCTCTCAAAAAGTCCCCCGGCTACCTCTCTTCTACTCCAGATCAGTTTGTCCAACCTCACACTACCCGCAGTCACGAGTTCCTTGGCCTAAGGCGAGGTTCCGGAGCATGGACTGCCTCGAATTACGGGAATGGCGTCATAATTGGCCTGGTTGACTCCGGAATTTGGCCTGAAAGTGCTAGCTTTAAGGACGAGGGTATGGGAAAACCTCCCCCTAGGTGGAAAGGTGCATGTGTGGCGGACGCCAACTTTACTTCTTCCATGTGCAACAACAAAATCATTGGAGCTCGGTATTACAATCGAGGTTTTCTAGCTAAATATCCAGACGAAACCATTTCGATGAACTCTTCTCGAGATTCAGAAGGACATGGAACCCACACTTCATCGACGGCTGCAGGCGCCTTTGTGGAGGGTGTATCCTATTTTGGGTATGCCAATGGTACTGCTGCAGGCATGGCACCACGGGCCTGGATAGCCGTGTATAAAGCGATCTGGAGTGGAAGAATTGCGCAATCGGATGCTCTAGCCGCAATTGATCAGGCAATTGAGGACGGTGTCGATATACTGTCCTTGTCCTTCTCCTTTGGAAACAACAGCTTGAACCTGAACCCCATTTCAATAGCTTGTTTCACAGCTATGGAGAAGGGCATATTCGTGGCTGCGTCGGCAGGAAACGACGGGAACGCCTTCGGAACCTTAAGCAATGGAGAACCATGGGTGACAACAGTTGGTGCTGGTACCATGGACAGAGATTTGTATGGCATCTTAACTTTGGGAAATGGAGTTCAAATCCCCTTTCCTTCGTGGTATCCTGGGAATCCTTCTCCACAGAACACGCCATTGGCTCTCAGTGAATGTCATAGCAGCGAAGAATACCTAAAAATTCGAGGCTACATTGTTGTATGCATAGCTTCTGAATTCGTCATGGAAACCCAAGCATACTATGCCAGGCAAGCAAACGCAACAGCTGCTGTCTTCATTTCTGAGAAAGCTCTGTTTCTGGATGACACCCGAACTGAATACCCATCTGCGTTCCTCCTTATCAAGGACGGCCAAACTGTCATAGACTACATAAACAAGAGCAGTGATCCAAGAGCGAGTATGGCATTTCAGAAGACAGAAATGGGTACCAAGCCCGCTCCAATGGTGGATATATATAGCTCAAGAGGGCCATTTATACAATGCCCCAATGTCTTAAAGCCTGATATTCTAGCTCCTGGCACATCAGTTCTGGCAGCATGGCCTTCAAATACTCCAGTTTCTGATAATTTTTATCACCAATGGTATTCTGACTTCAATGTCTTGTCTGGGACATCCATGGCCACTGCTCACGTTGCGGGCGTGGCTGCTCTAGTAAAGGCAGTGCACCCAAATTGGAGCCCGGCTGCCATTCGATCTGCACTGATGACCACAGCTAATACATTGGACAATACTCAAAACCCCGTCAAAGAGGTTTCTAATGATACAGTCACCGCACTAGATATGGGAGCCGGCCAGGTGAACCCCAATAAGGCACTTGATCCAGGGCTCATCTACAATGCAACTGCAGAAGATTATGTGCAGCTTCTTTGTGCCATGGGCTTCACAGCAAAGGAGATTCAAAAGATTACAAGATCCTCCTATGAATGTTTGAACCCGTCTTTGGATCTTAATTACCCATCTTTCATTGCTTACTTCAATGATGAGAGTTCAGCCCCAGATGAACTTGTACAAGTATTTCACAGGACTGTTACTAATGTTGGGGAAGGGCAGTCCAATTATACTGCAGAACTCACACCCCTGAAAGGATTAAAGGTGAAGGTCGACCCAGAGAAATTGGTATTCAATTGCAAGCATGAGACGCTGAGCTACAATCTTACTTTAGAGGGCCCAAAATCCATGACAGAGTATCTGGTATATGGCCATCTCAGTTGGGTCTCGGATGGTGGGAAATATGTTGTGAGAAGTCCAATTGTGGCAACAAGGATGGACCCCGGAATGGCTCCTGACTTCTTCGGTGGTTTCTGA 2199 0.4779 MDSSAMPKPFSGHHGWYSSMLSSVSDASTPTGAAVTPSTTAKLIYTYSNSINGFSASLTLSELEALKKSPGYLSSTPDQFVQPHTTRSHEFLGLRRGSGAWTASNYGNGVIIGLVDSGIWPESASFKDEGMGKPPPRWKGACVADANFTSSMCNNKIIGARYYNRGFLAKYPDETISMNSSRDSEGHGTHTSSTAAGAFVEGVSYFGYANGTAAGMAPRAWIAVYKAIWSGRIAQSDALAAIDQAIEDGVDILSLSFSFGNNSLNLNPISIACFTAMEKGIFVAASAGNDGNAFGTLSNGEPWVTTVGAGTMDRDLYGILTLGNGVQIPFPSWYPGNPSPQNTPLALSECHSSEEYLKIRGYIVVCIASEFVMETQAYYARQANATAAVFISEKALFLDDTRTEYPSAFLLIKDGQTVIDYINKSSDPRASMAFQKTEMGTKPAPMVDIYSSRGPFIQCPNVLKPDILAPGTSVLAAWPSNTPVSDNFYHQWYSDFNVLSGTSMATAHVAGVAALVKAVHPNWSPAAIRSALMTTANTLDNTQNPVKEVSNDTVTALDMGAGQVNPNKALDPGLIYNATAEDYVQLLCAMGFTAKEIQKITRSSYECLNPSLDLNYPSFIAYFNDESSAPDELVQVFHRTVTNVGEGQSNYTAELTPLKGLKVKVDPEKLVFNCKHETLSYNLTLEGPKSMTEYLVYGHLSWVSDGGKYVVRSPIVATRMDPGMAPDFFGGF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1245 732 Pfam Subtilase family 107 541 IPR000209 GO:0006508|GO:0008236
Vvi7g1245 732 FunFam Subtilisin-like protease SBT1.9 1 84 - -
Vvi7g1245 732 PRINTS Subtilisin serine protease family (S8) signature 107 126 IPR015500 -
Vvi7g1245 732 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Vvi7g1245 732 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Vvi7g1245 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 84 IPR037045 -
Vvi7g1245 732 FunFam Subtilisin-like protease SBT3 587 720 - -
Vvi7g1245 732 ProSiteProfiles Serine proteases, subtilase domain profile. 91 570 - -
Vvi7g1245 732 Gene3D - 587 720 - -
Vvi7g1245 732 Gene3D - 313 440 - -
Vvi7g1245 732 FunFam Subtilisin-like protease SBT3 313 439 - -
Vvi7g1245 732 CDD PA_subtilisin_like 320 431 - -
Vvi7g1245 732 SUPERFAMILY Subtilisin-like 83 574 IPR036852 GO:0004252|GO:0006508
Vvi7g1245 732 FunFam Subtilisin-like protease SBT1.5 109 320 - -
Vvi7g1245 732 Gene3D Peptidase S8/S53 domain 109 583 IPR036852 GO:0004252|GO:0006508
Vvi7g1245 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 716 IPR045051 -
Vvi7g1245 732 CDD Peptidases_S8_3 81 537 IPR034197 -
Vvi7g1245 732 Pfam Peptidase inhibitor I9 5 82 IPR010259 -
Vvi7g1245 732 Pfam Fibronectin type-III domain 613 716 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1245 Vvi-Chr7 16714870 16717068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1245 1 720 Subtilisin-like Serine Gene Family AT5G67090 45.935 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1245 - - vvi:100266245 1465.29