Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1230 ATGGCTAGCAATCAGGAAGGGCAGCAAAACCAAGCTGGTAGACACCAGGAGGTTGGCCACAAGAGTCTGTTACAGAGTGATGCTCTTTACCAGTATATACTTGAGACCAGCGTTTATCCCAGAGAGCCGAAGCCCATGAAAGAGCTGCGAGAGTTGACGGCAAAACACCCCTGGAACATCATGACGACCTCGGCTGATGAAGGGCAGTTCTTGAACATGCTGCTCAAACTCATCAACGCCAAGAACACCATGGAAATCGGCGTTTACACCGGCTACTCCCTCCTCGCCACCGCCCTCGCTCTTCCCGACGACGGAAAGATACTGGCTATGGACATCAACCGTGAAAATTACGAATTGGGTCTTCCAATCATCGAGAAAGCTGGTCTTGCACACAAGATTGATTTCAGAGAAGGTCCAGCCCTCCCGGTTCTTGATCAGATGATAGAAGATGGAAAGTATCATGGGACATTCGATTTTATTTTCGTGGACGCTGACAAGGACAACTACCTGAACTACCACAAAAGGCTGATTGATCTGGTCAAGGTTGGAGGATTGATAGGCTACGACAACACCCTATGGAACGGCTCTGTGGTCGCACCACCTGATGCCCCTCTCCGCAAGTACGTTAGATATTATAAGGACTTCGTGTTGGAGCTCAACAAGGCCCTGGCCGCTGATCCCCGGATCGAGATTTGTCAGCTTCCTGTTGGCGATGGGATCACCCTGTGCCGCCGCATCAGCTGA 744 0.5094 MASNQEGQQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPKPMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPIIEKAGLAHKIDFREGPALPVLDQMIEDGKYHGTFDFIFVDADKDNYLNYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYKDFVLELNKALAADPRIEICQLPVGDGITLCRRIS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1230 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Vvi7g1230 247 FunFam Caffeoyl-CoA O-methyltransferase 1 15 247 - -
Vvi7g1230 247 PANTHER O-METHYLTRANSFERASE-RELATED 20 246 - -
Vvi7g1230 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Vvi7g1230 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Vvi7g1230 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1230 Vvi-Chr7 16584464 16585847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1230 3 247 Monolignol Biosynthesis Gene Families AT4G34050 86.939 1.46e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1230 K00588 - vvi:100243978 502.671