Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1227 ATGGAAGAAAACAGGCAGAGGTTGGTTGGTATCACAAAACATCTTCATAAATTGTCAGAGGAAAGAAGAAACAACAGGAATAGTGATATTGACAAAAGTGTAGATCTATTAACGAAGAGGCAAAGAGATGCACTTGATATGCAAAATGGTAATGATGCAAATAATGGGGATAAGGCTAGCCATTGTTCCCAAGAAGATGGACATGTGTCTTCAGCAGTTCTCCTAGGATCTAGTATTGCGGTCAAGAATGCTGTTCGCCCTATCAAACTTACTGAAGTGAAAAGATTGCCTCCTTATACCACATGGATTTTCTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTAGTTGGTCGTAGGAGAATTTATTATGACCAAACTGGTGGTGAAGCTTTAATTTGCAGTGACAGTGAGGAGGAAGCTATTGAAGAAGAAGAAGAAAAGAAAGAGTTTGCAGATTTTGAGGATTATATACTTCGAATGACCATCAAAGAAACTGGTTTATCTGATCCTGTGCTTGAGGCATTGGGGCGGTATCTTTCTAGAAAACCTTGCGAAGTCAAGGCAAGATATGAAATTCTTAATAAGGGAGAGAAGTCTGTGGTGGGCTCTAAGAATGGGGTGATCGAAGACATTTCACAAACTTTGACTTCTTATCTTGATAAAGATCTTGATGCAGCTCTGGATTCTTTTGATAACCTATTTTGCCGTCGATGTCTTGTCTTTGATTGTAGATTGCATGGATGCTCACAGGATCTCGTCTCTCCAGCTGAGAAACAACTTCCATGGAATCATCTTGATGAGGACAATATACCATGTGGCGCACATTGTTATCGATTGGCTGTGAAGTCTGAAAGCATTGGTATGGTGAGCTCTCCTGTGTGTGCTGATTTTGAAGACAAAACCGCTCCTTCATCTGATGGTGCTGGGCCTCATTTATCATCTAGAAAGAACTGTGGTCCATCTAGTAAAAGGAGGGCAAAGTCCTGCCAAAGTGAAAGCGCTTCATCAAATGGAAAAAACATATCTGAAAGCAGTGACTCAGAGATTAGACCGAAGCAGGACACCACCTCTACTCATCACTCTTCATCCCCACCCAAGACTAGACTTGTTGGAAAATGTGCAATTCGTAAGAGAAACAGCAAGCGAGTTGCTGAGCGTGTTCTGGTTTGCATGCGGAAAAGGCAGAAAATGGTGGCTTCGGATTCTGATTCCATTTTGAGTGGACGGCTTTGGCCTAGAGATATGAAACTTAGATCTAATTCACGTAAAGAGAATGAAGATGCTAGTTCTTCTTCACTGAAAAAGGTGAAACCTTCAATCACTGGAAGGTCTAGGAGGAAGTGTTCGCCAGTCCAGGACAGTAACAAATTGGTGGAAGGTGAAGTTCCTGAGGGCCAAATGAACGAGATGATTAATGATCCGCCTGCAAGTAGCAGTGATGACACATTGAGGAAAGAAGAATTTGTAGATGAAAGCATGTGTAAACAAGAAAGAAGTGATGATAAATCCTGGAAAGCAATTGAAAAAGGCTTTTTTGAGAAAGGTGTAGAAATTTTTGGCAGGAACAGCTGCTTAATAGCTAGGAACCTTCTCAATGGTATGAAGACATGTTTGGAGGTATTTCAATTTATGAATTGCTCTGAAAATAAGCCATTCTTCCGAGCTGGGGATGGTTCCAATTCTATGGTTGAAGGCTATTCTAAGGGTAATGAAGTAAGAAGAAGATCAAGATTTTTACGCAGGCGGGGTAGAGTTCGCCGCTTGAAGTATACTTGGAAATCTGCCGGTTACCATTCAATTAGGAAACGCATATCTGAGAGAAAAGATCAGCCTTGTCGGCAGTACAACCCATGTGGTTGCCAATCTGCATGTGGAAAGCAGTGTGCTTGTCTTCTAAATGGGACATGCTGTGAAAAATACTGTGGATGCCCTAAGAGTTGCAAGAATCGATTTAGAGGTTGCCATTGTGCCAAAAGTCAGTGCCGAAGTCGTCAATGTCCATGCTTTGCGGCAGACAGGGAATGTGATCCAGATGTTTGTCGGAATTGCTGGATCAGTTGTGGTGATGGTACTCTTGGTGTACCAAGCCAAAGAGGTGATAATTATGAATGTAGAAATATGAAGCTTCTTCTCAAACAGCAACAAAGGGTTCTGCTTGGGAGGTCTGATGTATCTGGTTGGGGAGCGTTCTTAAAGAATAGTGTGGGCAAACATGAATATCTTGGTGAGTACACTGGAGAACTGATTTCACACAGGGAAGCAGATAAGCGTGGAAAGATTTATGACCGTGAAAATTCTTCGTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCCTATAGAAAAGGTGACAAATTGAAGTTTGCCAACCATTCTCCAGATCCTAATTGCTATGCAAAGGTGATTATGGTCGCAGGGGATCACAGGGTTGGCATATTTGCCAAGGAACGAATTAGCGCAGGAGAGGAACTCTTTTATGATTACCGTTATGAGCCAGATAGAGCTCCTGCATGGGCTAGGAAGCCAGAGGCGTCTGGTGTGAAGAAAGAGGATGTTGCTCCTTCTAGTGGCCGTGCTAAAAAGCTTGCTTAA 2601 0.421 MEENRQRLVGITKHLHKLSEERRNNRNSDIDKSVDLLTKRQRDALDMQNGNDANNGDKASHCSQEDGHVSSAVLLGSSIAVKNAVRPIKLTEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEEAIEEEEEKKEFADFEDYILRMTIKETGLSDPVLEALGRYLSRKPCEVKARYEILNKGEKSVVGSKNGVIEDISQTLTSYLDKDLDAALDSFDNLFCRRCLVFDCRLHGCSQDLVSPAEKQLPWNHLDEDNIPCGAHCYRLAVKSESIGMVSSPVCADFEDKTAPSSDGAGPHLSSRKNCGPSSKRRAKSCQSESASSNGKNISESSDSEIRPKQDTTSTHHSSSPPKTRLVGKCAIRKRNSKRVAERVLVCMRKRQKMVASDSDSILSGRLWPRDMKLRSNSRKENEDASSSSLKKVKPSITGRSRRKCSPVQDSNKLVEGEVPEGQMNEMINDPPASSSDDTLRKEEFVDESMCKQERSDDKSWKAIEKGFFEKGVEIFGRNSCLIARNLLNGMKTCLEVFQFMNCSENKPFFRAGDGSNSMVEGYSKGNEVRRRSRFLRRRGRVRRLKYTWKSAGYHSIRKRISERKDQPCRQYNPCGCQSACGKQCACLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWISCGDGTLGVPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGVKKEDVAPSSGRAKKLA* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1227 866 MobiDBLite consensus disorder prediction 842 866 - -
Vvi7g1227 866 Gene3D SET domain 617 834 IPR046341 -
Vvi7g1227 866 SUPERFAMILY SET domain 598 837 IPR046341 -
Vvi7g1227 866 MobiDBLite consensus disorder prediction 842 859 - -
Vvi7g1227 866 FunFam Putative histone-lysine N-methyltransferase EZH2 617 834 - -
Vvi7g1227 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 864 IPR045318 GO:0006338|GO:0042054
Vvi7g1227 866 MobiDBLite consensus disorder prediction 309 346 - -
Vvi7g1227 866 ProSiteProfiles CXC domain profile. 603 702 IPR026489 -
Vvi7g1227 866 MobiDBLite consensus disorder prediction 303 378 - -
Vvi7g1227 866 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 866 IPR025778 GO:0031519
Vvi7g1227 866 MobiDBLite consensus disorder prediction 418 433 - -
Vvi7g1227 866 Pfam SET domain 728 831 IPR001214 GO:0005515
Vvi7g1227 866 MobiDBLite consensus disorder prediction 418 455 - -
Vvi7g1227 866 MobiDBLite consensus disorder prediction 46 65 - -
Vvi7g1227 866 SMART set_7 717 838 IPR001214 GO:0005515
Vvi7g1227 866 ProSiteProfiles SET domain profile. 717 832 IPR001214 GO:0005515
Vvi7g1227 866 CDD SET_EZH 717 833 - -
Vvi7g1227 866 SMART CXC_2 651 688 IPR033467 -
Vvi7g1227 866 Pfam CXC domain 655 686 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1227 Vvi-Chr7 16560372 16572155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1227 706 835 C2H2 Transcription Factor Family AT2G23740 27.211 5.61e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vvi7g1227 SET 4.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1227 - K11430 vvi:100249229 1727.22