Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1225 ATGGGCACCGACCAAATTTCCTCTTTGCAAGCCCTGTTGGCCCTTCTCTGGCGATCCGTAACTCGCAGTAGGCGTTTCCCAGAGGATCAAGAGAGCTGGTATGCATTTCTAATAGGTATGAGACCAAGGATGCGTCCACCATTGCCCCAACAATATTTTGGGGCTGCAGCTCAGTCCGGAATCGTAACGATGAAAGCAGATGAGCTACTGGAGCGCGGTTTGGGTCATGCGGCTTGGCAGATGAATAAGATGGTCGCTGCCAATACTGCATTAGAAGCCACCAATTTCTTGGAATCCTGGATAAAAAACCCAATGCCCTTTCCACTTATAAATTTTATAATCAACAATTCTTTGTGCATGAGCGGTTCGCCACGATTCAATGTGTACGGTACTGATTTTGGTTGGGGAAGACCAATTGCGGTTAGAAGTGGAGGTGGGAACAAGCCTTATGGGAAGACCACCCTTTTTCAGGGAGCAGACGAAGGAAGCATTGATATTGAAGCTTGCCTGTTTGCTGAAACCTTTGAGGCTATGATGGAGGATGCCGAGTTCATGGAAGCTGTCACCGTTTGA 573 0.4782 MGTDQISSLQALLALLWRSVTRSRRFPEDQESWYAFLIGMRPRMRPPLPQQYFGAAAQSGIVTMKADELLERGLGHAAWQMNKMVAANTALEATNFLESWIKNPMPFPLINFIINNSLCMSGSPRFNVYGTDFGWGRPIAVRSGGGNKPYGKTTLFQGADEGSIDIEACLFAETFEAMMEDAEFMEAVTV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1225 190 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 186 - -
Vvi7g1225 190 Pfam Transferase family 5 185 - -
Vvi7g1225 190 Gene3D - 1 184 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1225 Vvi-Chr7 16533329 16533901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1225 3 173 Monolignol Biosynthesis Gene Families AT5G48930 29.670 1.04e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1225 - - vvi:100250876 246.514