Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1224 ATGGCAGAAATCAGCATCATCTCTACCACTTTGGTTGGACCGGTGAGTACGAGGGAGTCAACCACGAGAATTGAGTTGACTCCATGGGAGCTACAGTTTCTTCCCGTCGGTCCCATCCAAAAGGGTCTTCTCTTTCTCAAGCCTACGCCCCCACCACAAGAGAGTAGTGTCATAGATCACTTGAAAACCTCCCTCTCTCGCACTCTAGATCTGTTCTATCCACTTGTCGGCCGCCTTGGCACCACCGTAAACGACGACAATACCACTTACTTCTTCATCAACTGCAATGGCGCCGGAGCTCAGTTTGTCCATGCAGCTGCCGATAGTGTCATCGTGGCCGACATACTTGAGTCTGTCTACGTTCCTCGAATCGTCCACTCCTTTTTCCCACTCAATGGGGTTCGCAACTCCGAAGGCGTTTCCCAGCCACTCCTGGGAGTGCAAGTGACTGAACTTGTTGATGGCATCTTTATTGGCTGTACTATCAATCACTCAATTGCAGACGGCGCTTCCTTCTGA 519 0.5087 MAEISIISTTLVGPVSTRESTTRIELTPWELQFLPVGPIQKGLLFLKPTPPPQESSVIDHLKTSLSRTLDLFYPLVGRLGTTVNDDNTTYFFINCNGAGAQFVHAAADSVIVADILESVYVPRIVHSFFPLNGVRNSEGVSQPLLGVQVTELVDGIFIGCTINHSIADGASF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1224 172 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 172 - -
Vvi7g1224 172 Pfam Transferase family 3 172 - -
Vvi7g1224 172 Gene3D - 1 172 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1224 Vvi-Chr7 16527989 16528507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1224 61 171 Monolignol Biosynthesis Gene Families AT5G48930 35.652 1.17e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1224 - - vvi:100250876 268.47