Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1221 ATGATCCCGCTACCCCATACGAATTCCTCGGTCGCTACTAGTCTGCTAGGCGCACAAGCGCACCACTACAAGAGAGGATTTTCCACTTCACAAAAGGATAAAAATGCAGTGCTCAAAGTAAGAGCCAATGCAGAAATGGGCACCCACAAAATTTCCTCTTTGCAAGCCCTCTTGGCCCATCTTTGGCGATCCGTTATTCGTAATAGGCGTTTACTAGAGGATCAAGAGACTATGTACCGGTTCCCAACAGGTATGAGACCAAGGCTGCATCCACCATTGCCCCAACAATATTTTGGGGCTCCAGTTCAACTGGGAATGGTTACGATGAAAGAAGGGGAGCTACTGAAGCTGGGTCTTGATCATGCGGCTTGGCAGTTGAACAAGGTGATTTCTACTTACACTGAAGCAGAAGCTAGCCATCAACTTCTTGGAATCTTGGGTGAAGAACCCTAA 453 0.4746 MIPLPHTNSSVATSLLGAQAHHYKRGFSTSQKDKNAVLKVRANAEMGTHKISSLQALLAHLWRSVIRNRRLLEDQETMYRFPTGMRPRLHPPLPQQYFGAPVQLGMVTMKEGELLKLGLDHAAWQLNKVISTYTEAEASHQLLGILGEEP* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1221 150 Pfam Transferase family 31 137 - -
Vvi7g1221 150 Gene3D - 25 150 IPR023213 -
Vvi7g1221 150 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 31 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1221 Vvi-Chr7 16510455 16510907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1221 32 130 Monolignol Biosynthesis Gene Families AT5G48930 34.343 3.43e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1221 - - vvi:100250876 161.77