Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1220 ATGGAAGGAATTATAAGTTTCATTTCCACAACTACAGTTAGACCGGCGAGTCCGGAGGAGTCAACCAGGAGGATCGAGTTAACCCCATGGGACCTCCAGTTGCTTCTACTTGGCTCTATCAAAAAGGGCCTTCTCTTTCTCAAGCCGACACCCGGACCAGAGGAGAATGGATTACAAACCATAACTGCTATTGTAGATCATTTAAAGACCTCACTTTCTCGCACTCTGGACTTCTTCTACCCACTCGCCGGCCGCCTTGGTACCACTGTAAACGAAGACGACGACACAACTTGTTTCTTCATCGACTGCAACGGCGCCGGAGCTCAGTTTATCCATGCAGCGGCCGGTGGTGTCACCGTGGCAGATATACTGGACCCTGTCTATGTTCCTAAGATTGTGTCTTCTTTTTTCCCGCTTGATGGAGTTCAGAACTACCACGGCGTTACACAGCCGCTGCTTGCGGTGCAAGTGACGGAGCTGGTGGACGGGATCTTTGTTGGTTGCTCCCTCAATCATGTGGTGGGGGATGGAAAGTCCTTCTGGCATTTCTTCAATTCGTGGTCGGAAATCTCTCGGGGTCCCAATAAAATATCCGTATCTCCTGTTTTCAAGCGTTGGTTTGGGGATGATACCGACTACCCCATACGAATTCCTCGGTCAGCAATGGTCTTTGATCGGCCCATCACATCATCACCAGTTCAAGAAATGGTTTTTCGCTCCGCAAAAGAAAAAATTGCAGGGTTGAAAGCAAGAGCAAATGCAGAAATGGGCATCGACCGAATTTCTTCTTTACAGGCGCTGCTGGCCCATCTTTGGCGCTGCACAATTCGTACTAGGCGTCTCCCAGAAGATCAAGAGACTAGCTATCATTTATGCATAGATATGAGAACGAGGCGACGTCCACAGATGCCCCAGCAATACTTTGGGGTTGCACTTCAGCGCGGGACCTTAACCATGAAAGTGGGGGAGCTGCTGGGGATGGGTCTGGGTCATGTGGCTTGGCAAATGAATAAGATGATTTCTACCTTCACTGAAGTGGAAGCCACCAACTTCTTGGAATCTTGGGCGAAAGACCCTAAGCCGATTTCATATAGCACCGTCACTATGAGTAATGCTTTTATCATGGCCAGTTCGCCGCGGTTCAACGTGTACGGCACTGATTTTGGTTGGGGAAGGCCAGTTGCTGTTAGAAGTGGAGGTGGGATCAAGTTGGATGGAAAGACCACCATTTCCCAAGGAGCAGAAGAAGGGAGCATTGATATTGAAGTTTGCTCATCGCCTGAGACCTTGCAGGCTATGTTGGAAGATGCAGACTTCATGGAAGCTGTCACTGCTAGCTTCATCTAA 1347 0.4922 MEGIISFISTTTVRPASPEESTRRIELTPWDLQLLLLGSIKKGLLFLKPTPGPEENGLQTITAIVDHLKTSLSRTLDFFYPLAGRLGTTVNEDDDTTCFFIDCNGAGAQFIHAAAGGVTVADILDPVYVPKIVSSFFPLDGVQNYHGVTQPLLAVQVTELVDGIFVGCSLNHVVGDGKSFWHFFNSWSEISRGPNKISVSPVFKRWFGDDTDYPIRIPRSAMVFDRPITSSPVQEMVFRSAKEKIAGLKARANAEMGIDRISSLQALLAHLWRCTIRTRRLPEDQETSYHLCIDMRTRRRPQMPQQYFGVALQRGTLTMKVGELLGMGLGHVAWQMNKMISTFTEVEATNFLESWAKDPKPISYSTVTMSNAFIMASSPRFNVYGTDFGWGRPVAVRSGGGIKLDGKTTISQGAEEGSIDIEVCSSPETLQAMLEDADFMEAVTASFI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1220 448 Gene3D - 223 435 IPR023213 -
Vvi7g1220 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 441 - -
Vvi7g1220 448 Gene3D - 4 212 IPR023213 -
Vvi7g1220 448 Pfam Transferase family 5 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1220 Vvi-Chr7 16497761 16499107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1220 68 431 Monolignol Biosynthesis Gene Families AT5G48930 28.010 2.67e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1220 - - vvi:100245729 885.174