Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1219 ATGGAAGGAATTATAAGTTTCATCTCAACAACTACAGTTAGACCGGCGAGTCCGGAGGAGTCAACCAAGAGGATTGAGTTAACTCCATGGGACCTCCATGTTCTTCTACTTGGTCCTATCACAAGGGGTCTTCTCTTTCTCAAGCCTACACCCGGACCAGAGGAGAATGGATTACAAACCATGACTGCTATTGTAGATCATTTAAAGACCTCACTTTCTCGCACTCTGGACTTCTTCTACCCACTCGCCGGCCGCCTTGGTACCACTGTAAACGACGACGACGACACCACTTGTTTCTTCATCGACTGCAATGGCGCCGGAGCTCAGTTTATCCATGCAGCGGCCGGCGGTGTCACCGTGGCCGATATACTCGACCCTGTCTATGTTCCTGAGATTGTGTCTTCTTTTTTCTCACAAGATGAAGTTCAGAACTACCAAGACGTTACCCAGCCGCTGCTCTCGGTGCAAGTGACGGAGCTGGTGGACGGGATCTTTGTTGGTTGTACCCTCAATCGTGTGCTGGCGGATGGAAAGTCCTTCTGGCATTTCTTCAATTCGTGGTCGGAAATCTCTCGGGGTTCCAATAAAATATCCCTATCTCCTGTTTTCAAGCGTTGGTTTGGGGATGATACCCACTACCCCATACGAATTCCTCAGTCAGCTATGGTCTTTGAGCGGCCCACCACATCATCGCCAGTTCAAGAAATGTTTTTTCACTTCTCAAAAGGAAAAATTGCGGGGTTGAAAGCAAGAGCAAATGCAGAAATGGGCACCGACCGAATTTCTTCTTTGCAGGCGCTGATGGCCCATTTTTGGCGCTCCACAATTCGTGCTAGGCATCTCCCCGAGGATCAAGAGACTATTTGTACATTAGCAATAGATATGAGACCGAGGCGACATCCACAGATGCCCCAACAATACTTTGGGGTTGCAGTTCAGGGCGGGATCGTAACAATGAAAGTAGGGGAGCTGCTGGGGATGGGGCTGGGTCATGTGGCTTGGCAAATGAACAAGATTATTTCTACCTTCACTGAAGTAAAAGCCACCAACTTCTTGAAATCTTGGGCGAAAGACCCTAAGCCGGCTACAGATAGCACCATAATGATGAGAATTGCTTTGATCATGGCCGGTTCGCCGCGGTTCAACGTATACGGCAATGATTTTGGTTGGGGAAGGCCAGTTGCGGTTAGAGGTGGAGGTGGGATCAAGTTGAATGGAAAGGCCACCAGTTTCCAAGGAGCAGAAGAAGGGAGCATTGATATTGAAGCTTGCTTATCGCCTGAGACCTTGAAGGCTCTGATGGAAGATGCAGAGTTCATGGGATGA 1326 0.4894 MEGIISFISTTTVRPASPEESTKRIELTPWDLHVLLLGPITRGLLFLKPTPGPEENGLQTMTAIVDHLKTSLSRTLDFFYPLAGRLGTTVNDDDDTTCFFIDCNGAGAQFIHAAAGGVTVADILDPVYVPEIVSSFFSQDEVQNYQDVTQPLLSVQVTELVDGIFVGCTLNRVLADGKSFWHFFNSWSEISRGSNKISLSPVFKRWFGDDTHYPIRIPQSAMVFERPTTSSPVQEMFFHFSKGKIAGLKARANAEMGTDRISSLQALMAHFWRSTIRARHLPEDQETICTLAIDMRPRRHPQMPQQYFGVAVQGGIVTMKVGELLGMGLGHVAWQMNKIISTFTEVKATNFLKSWAKDPKPATDSTIMMRIALIMAGSPRFNVYGNDFGWGRPVAVRGGGGIKLNGKATSFQGAEEGSIDIEACLSPETLKALMEDAEFMG* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1219 441 Gene3D - 218 435 IPR023213 -
Vvi7g1219 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 440 - -
Vvi7g1219 441 Pfam Transferase family 5 440 - -
Vvi7g1219 441 Gene3D - 4 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1219 Vvi-Chr7 16492156 16493481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1219 5 431 Monolignol Biosynthesis Gene Families AT5G48930 28.667 3.07e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1219 - - vvi:100245729 887.486