Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1206 ATGGAAGCGCCGGAGAATTGCTCCGTCAAGGTCGCGGTTCACATTCGTCCTCTCATCGGCGATGAGCGCCTTCAAGGATGTGAGGATTGTGTCACCGTTGTGCACGGGAAGCCTCAGGTGCAAATTGGTACTCATTCATTTACATTTGATCATGTCTATGGAAATAGTGGTTCTCCATCATCTGCTATGTTTGAAGAATGCATCGCTCCTCTGGTTGATGGTTTGTTCCAAGGATACAATGCGACTGTTCTCGCTTATGGTCAGACGGGGTCAGGTAAAACATATACAATGGGAACTGGCTTCAAAGATGGTTGCCAGACAGGACTGATTCCTCAAGCTATGAATGCATTGTTCAACAAGATTGAAACACTGAAACATCAATCTGAGTTCCAGTTGCACGTATCCTTCATTGAGATCCTAAAAGAAGAAGTGAGGGACTTGCTGGAATCCCCAACTGTGAGCAAACCAGAGGCTACTAATGGACATGCTGCGAGAATTGCTGTCCCTGGGAGGCCACCAATACAAATTCGTGAAACATCGAATGGAGTTATAACACTGGCTGGATCAACTGAAGTTAGTGTTAGCACACTTAAAGAAATGGCTTCTTGTCTTGAACAAGGATCATTCAGCAGGGCAACAGGGAGTACAAACATGAACAACCAGTCTAGTCGGTCTCATGCCATCTTCACAATCTCATTAGAACAGATGCGCAAACTCCATCCAACTTTTCCTGGTGATAATTGTTCAAATGAGGAGATGGGTGAGGAGTATTTAAGTGCAAAGCTTCATTTGGTAGATCTTGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGCCTTCGTTTCAAAGAAGGCATTCACATTAATAAGGGGCTTCTTGCACTTGGTAATGTCATCAGTGCACTGGGGGATGAGAAAAAGCGGAAAGAAGGTGTGCATGTTCCTTATCGAGATAGTAAACTTACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTTATGATAGCTTGCATCAGTCCTGCTGATATCAATGCTGAGGAAACTCTTAATACTCTCAAATATGCTAATCGCGCTCGTAATATCCAGAATAAGCCTGTTGTTAATAGAGACTTGGTATCAAATGAAATGCAGAAGATGCGCCAGCAGCTAGAGTACTTGCAGGCAGAACTTTGTGCTCGTAGGGGAGGAACTTCATCTGATGAAATGCAGGTTCTTAAGGAAAGGATTTCTTGGCTTGAGACTACCAATGAGGAACTATGTCGAGAACTTCATGAGTACCGAAGCAGATGTGCTGTTGTAGGGCAGTGTGAATCCAATGCTCAAGAAGGCAGCATTTGTTTTGTAAAAACTGATGGACTCAAGAGGGGCTTGCAGAGTATGGAATCATCTGATTATCCAATGGGTGAAGTTATAAGTGGTGAAGATTCCAGGGAGATGGATGAAGTAGCCGCAAGAGAGTGGGAGCATGCGCTTCTGCAGAATACCATGGACAAAGAATTGAATGAGTTAAACAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAACTTTTTGGGGGTGACACTGAAGCACTTAAGCAGCACTTTGGGAAGAAAATCATGGAACTTGAGGAAGAGAAAAGAATTGTGCAGCAAGAGAGAGACCGTTTATTAGCTGAAGTTGAAAGCCTTGCTGCCACTTCTGATGGACAAAGACAAAAGGTGCAAGATGTTCATGCACAGAAACTAAAAGCACTTGAAGCACAGATTTTAGATCTTAAGAAGAAACAAGAAAATCAGGTTCAGCTTTTAAAGCAAAAACAAAAAAGTGATGAAGCAACAAAGCGGCTGCAAGATGAAATACAGTCTATCAAAGCCCAAAAGGTACAGTTGCAGCACAAGATAAAACAAGAAGCAGAACAATTTCGACAATGGAAGGCCTCTCGTGAGAAGGAACTGCTTCAGCTGAAGAAAGAGGGTAGGAGAAATGAGTATGAGCGACATAAATTGCAAGCCCTGAATCAGCGCCAGAAAATGGTTCTTCAAAGAAAAACAGAAGAGGCTGCAGTAGCTACCAAAAGGCTGAAAGAGTTACTAGAAGCTCGCAAATCTTCAGCACGTGATAATTCCGTTTATTCCAATGGACATACACCAACAGGGCTGAACAATGAGAAGTCTTTGCAACGGTGGCTTGACCATGAGCTAGAAGTCATGGTGAATGTGCACGAAGTTCGTTTTGAATATGAGAAGCAAAGCCAAGTACGGGCTGCACTGGCTGAAGAGTTAGGCTTACTGAAACAAGTGGATCAGTTGTCTTTGAATGGGCTCAGTCCCCCAAGAGGAAAGAATGGACATTCTAGAATGTCCTCTATGTCACCAAATGCAAGATTGGCAAGAATAGCTACACTTGAGAACATGCTGAACATCTCTTCAAATGCGCTTGTGGCAATGGCTTCACAACTATCTGAGGCAGAAGAGCGGGAGCGTGCCTTTACTGGTCGCGGTCGTTGGAACCAGTTACGCTCAATGGGAGATGCAAAGAACCTGCTTCAATATATGTTTAATGCTGCTGGAGATGCAAGATGCCAGTTGTGGGAAAAGGAAATGGAAATCAAGGAAATGAAAGAGCAACTGAATGAACTTGTAATTCTACTGAGACAAAGTGAAGCACAGAGAAAAGAAATTGTGAAGGAGCAAAAATTGAGGGAGCAAGCCGTTGCTATTGCCCTTGCTACCTCAGCTTTGGGGAACTCAAACAATTCATTGAAACACCTTGCGGATGATATGAGTGATCCCTTATCTCCAGTTTCACGTCCGGCACAAAAGCAACTGAAATATACAGCTGGAATTGCCAATGGTTCAGTCAGAGAGTCAACAGCTTTTCTGGACCAGAAAAAGATGGTACCAATCGGGCAGTTGTCCATGAAAAAACTGGCCACAGTAGGTCAAGCTGGAAAACTGTGGAGGTGGAAGAGGAGTCATCACCAGTGGCTGCTACAGTTCAAGTGGAAGTGGCAGAAGCCATGGAGACTATCAGAATGGATCAAGCACAGTGATGAGACAATCATGAGGTCGAGGCCTCGTCCAAGGGCTCTGGTTGATACAATGTATGAAGATGGAGATCGATGCTCTCCACTATCTTTGGCTGAGACTTGTAAATGGGGATTGGGATTAGTTTTGGATGTGTTGGCTTTGGATAACTATTGGTTCAGAGACATCTCGTCCGGGTGGTGGCTCACAGATTGTGGATGA 3240 0.4401 MEAPENCSVKVAVHIRPLIGDERLQGCEDCVTVVHGKPQVQIGTHSFTFDHVYGNSGSPSSAMFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGLIPQAMNALFNKIETLKHQSEFQLHVSFIEILKEEVRDLLESPTVSKPEATNGHAARIAVPGRPPIQIRETSNGVITLAGSTEVSVSTLKEMASCLEQGSFSRATGSTNMNNQSSRSHAIFTISLEQMRKLHPTFPGDNCSNEEMGEEYLSAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDLVSNEMQKMRQQLEYLQAELCARRGGTSSDEMQVLKERISWLETTNEELCRELHEYRSRCAVVGQCESNAQEGSICFVKTDGLKRGLQSMESSDYPMGEVISGEDSREMDEVAAREWEHALLQNTMDKELNELNKRLEQKESEMKLFGGDTEALKQHFGKKIMELEEEKRIVQQERDRLLAEVESLAATSDGQRQKVQDVHAQKLKALEAQILDLKKKQENQVQLLKQKQKSDEATKRLQDEIQSIKAQKVQLQHKIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAVATKRLKELLEARKSSARDNSVYSNGHTPTGLNNEKSLQRWLDHELEVMVNVHEVRFEYEKQSQVRAALAEELGLLKQVDQLSLNGLSPPRGKNGHSRMSSMSPNARLARIATLENMLNISSNALVAMASQLSEAEERERAFTGRGRWNQLRSMGDAKNLLQYMFNAAGDARCQLWEKEMEIKEMKEQLNELVILLRQSEAQRKEIVKEQKLREQAVAIALATSALGNSNNSLKHLADDMSDPLSPVSRPAQKQLKYTAGIANGSVRESTAFLDQKKMVPIGQLSMKKLATVGQAGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIKHSDETIMRSRPRPRALVDTMYEDGDRCSPLSLAETCKWGLGLVLDVLALDNYWFRDISSGWWLTDCG* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1206 1079 Coils Coil 860 894 - -
Vvi7g1206 1079 Gene3D Kinesin motor domain 1 393 IPR036961 -
Vvi7g1206 1079 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Vvi7g1206 1079 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1027 IPR027640 GO:0003777|GO:0007018
Vvi7g1206 1079 Pfam Kinesin motor domain 35 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 Coils Coil 677 697 - -
Vvi7g1206 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Vvi7g1206 1079 Coils Coil 406 426 - -
Vvi7g1206 1079 Coils Coil 497 524 - -
Vvi7g1206 1079 CDD KISc_KIF4 7 366 - -
Vvi7g1206 1079 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi7g1206 1079 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi7g1206 1079 Coils Coil 373 393 - -
Vvi7g1206 1079 Coils Coil 529 563 - -
Vvi7g1206 1079 Coils Coil 572 637 - -
Vvi7g1206 1079 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1206 Vvi-Chr7 16346717 16362558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1206 9 389 Calmodulin-binding Proteins AT5G65930 34.625 6.28e-53 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1206 - - vvi:100247311 2015.74