Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1201 ATGGCTGTGGAGCTGATGATGGGTTACAGAAACGATGGTTTTGCCGACAAAATGGAGGAGAACGCTGTGCAGGAAGCCGCTGCTGGGCTGGAAAGCGTCGAGAAGCTGATAAGGTTGCTGTCTCATGGTCAACAGCAACAGTCTCAGCAGCAGCCGCAGCAGCAGCTGGGTCGATCGTCTGGGGAAATGGAGATGGATTGCAGGGCCGTGGCGGATGTCGCCGTTTCCAAGTTCAAGAAGGTGATTTCTCTTCTGGGTCGGACCAGAACCGGTCACGCTCGGTTCAGGAGGGCTCCTTTGTCCTCTCCTCCCAACCAAAGCGAGGAATCACAGGGCGGTGGGTCTAGGGTTTATTGTCCTGTTCCGATCCAGCAGGTCCCTCCGGTTCCGATCCAAAATCAACACCAACCCCACAACGATCCTCCCGTGGTTTTCGCGAGGAATGGTGTGATCGATCGTAAAGATTCGACGACCACCATCAATTTCTCATACTCTTCGGCGATTTCCGGTGCGAATTCGTTTATGTCGTCGCTGACTGGCGATACTGATAGCAAGCAACCCTCATCGTCGTCGGCTTTTCAGATTACGAATCTGTCTCAGGTTTCGTCGGTGGGAAGGCCGCCGCTGTCTTCTTCGTCCATGAAAAGGAAGTGCAGTTCGTCGGACAATCCCGGCTCCGGCAAGTGCGGTGGGTCCTCTGGCCGGTGCCATTGTTTGAAGAGAAGAAAGATGAAATTGAAGAGGGTGGTTAGAGTTCCGGCAATAAGCATGAAAATGGCCGATATTCCACCAGATGATTTCTCTTGGAGGAAGTACGGACAGAAACCAATAAAAGGATCTCCACATCCAAGGGGCTACTACAAGTGCAGTAGCGTGAGAGGTTGCCCAGCACGCAAACATGTAGAGAGAGCTCTGGACGACCCAAAGATGCTGATTGTCACCTACGAAGGCGAGCACAACCACTCTCTCTCCGTCGCAGAAGCCGCTGGTCTCATCCTAGAATCTTCTTAG 1011 0.5302 MAVELMMGYRNDGFADKMEENAVQEAAAGLESVEKLIRLLSHGQQQQSQQQPQQQLGRSSGEMEMDCRAVADVAVSKFKKVISLLGRTRTGHARFRRAPLSSPPNQSEESQGGGSRVYCPVPIQQVPPVPIQNQHQPHNDPPVVFARNGVIDRKDSTTTINFSYSSAISGANSFMSSLTGDTDSKQPSSSSAFQITNLSQVSSVGRPPLSSSSMKRKCSSSDNPGSGKCGGSSGRCHCLKRRKMKLKRVVRVPAISMKMADIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPKMLIVTYEGEHNHSLSVAEAAGLILESS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1201 336 Gene3D WRKY domain 250 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1201 336 MobiDBLite consensus disorder prediction 41 60 - -
Vvi7g1201 336 Pfam Plant zinc cluster domain 215 261 IPR018872 -
Vvi7g1201 336 SUPERFAMILY WRKY DNA-binding domain 260 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi7g1201 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 323 IPR044810 GO:0003700
Vvi7g1201 336 FunFam WRKY transcription factor 65 247 324 - -
Vvi7g1201 336 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1201 336 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1201 336 MobiDBLite consensus disorder prediction 93 117 - -
Vvi7g1201 336 MobiDBLite consensus disorder prediction 41 63 - -
Vvi7g1201 336 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi7g1201 336 MobiDBLite consensus disorder prediction 178 233 - -
Vvi7g1201 336 MobiDBLite consensus disorder prediction 178 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1201 Vvi-Chr7 16322598 16323899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1201 17 336 WRKY Transcription Factor Family AT2G24570 46.407 2.65e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi7g1201 WRKY 6.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1201 - - vvi:100244122 598.586