Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1192 ATGGCCCTGCAAGAACAAGAGACTCTGTCGCAGAACGCTCCATTCTTTCTTGATGGTCTCTACTGTGAAGAAGAGCGTTTTGGGGACGATGATGATGGGGAAGTAGAAGAAGCGAGTGAGATTGAGAAATGTGACCGTGAGAAAAAACAATCTCTTTTTCCTTTGACTTTGCTTGAACACGACCTGTTTTGGGAAGATGATGAACTTTGCTCTCTAATCTCAAAAGAAGAACAGGCCCATCATTGTTACAGTGGCATAATCTCAGATGGGTTTTTAACGGTGGCTCGTACAAAGGCTGTTGAGTGGATGCTGAAGGTCAATGCTCACTATGGGTTTTCTGCTCTGACTGCAGTTCTTGCTGTTAACTACTTTGATAGGTTTCTGTCGAGTTCGTGTTTTCAGAGAGATAAGCCCTGGATGAGTCAACTCGCTGCTGTCACTTGTCTCTCTTTGGCTGCAAAGGTGGACGAGACCGATGTTCCTCTTCTCTTGGACCTGCAGGTGGAGGAGACAAAATATGTGTTTGAAGCGAAGACGATTCAGAGGATGGAACTTCTGGTGCTCTCTAGTCTTCAGTGGAAGATGAATCCAGTGACCCCAATTTCGTTTTTTGATCACATTATAAGGAGGCTTGGATTGAAGACCCACTTGCATTGGGAGTTTCTGGAGAGGTGTGAGCGCCTTCTCCTCTCTGTCATTGCTGATTCGAGGTTCTTGTGTTATCTTCCTTCCACCTTAGCTACTGCAACCATGCTGCATATAATCACAGAGGTTGAACCTTGTAATCCATTGGAATACCAGAATCAGCTTCTGAGTGTACTCAAAATCAGTAAGGTTTGTAGCCAAAGAAATTGGATATTTTGTTTCTATATTAGCTTTTATCTCTTACTTTGA 894 0.4362 MALQEQETLSQNAPFFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLTLLEHDLFWEDDELCSLISKEEQAHHCYSGIISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSSCFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHIITEVEPCNPLEYQNQLLSVLKISKVCSQRNWIFCFYISFYLLL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1192 297 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Vvi7g1192 297 CDD CYCLIN_AtCycD-like_rpt2 198 278 - -
Vvi7g1192 297 Pfam Cyclin, N-terminal domain 93 196 IPR006671 -
Vvi7g1192 297 Gene3D - 82 196 - -
Vvi7g1192 297 SMART cyclin_7 101 189 IPR013763 -
Vvi7g1192 297 SUPERFAMILY Cyclin-like 63 196 IPR036915 -
Vvi7g1192 297 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Vvi7g1192 297 PANTHER CYCLINS 67 253 IPR039361 -
Vvi7g1192 297 Gene3D - 76 280 - -
Vvi7g1192 297 FunFam D3-type cyclin 89 196 - -
Vvi7g1192 297 FunFam CYCLIN D32 197 283 - -
Vvi7g1192 297 Pfam Cyclin, C-terminal domain 198 279 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1192 Vvi-Chr7 16255271 16256412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1192 4 278 Core Cell Cycle Gene Families AT4G34160 58.696 9.60e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1192 K14505 - vvi:100267897 555.444