Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1184 ATGGAGGGAAGAAGGGTTGTTGGTTGGGCTGCTAGGGATGCTTCTGGGCTTCTCTCTCCTTATTCATTCACTCTCAGAAAAACAGGTCCTGAAGACGTGGTGATCAAGGTGCTCTACTGTGGAATGGACCACACGGATCTTCATCAGATGAGGAACGAAGTACACTCCACTAATTACCCTTTGGTCCCAGGGCATGAAGTAGTGGGGGAAGTGGTGGAGTTGGGTTCAGAAGTGAAGAAATACAGAGTTGGGGACATGGTAGGAGTTGGATGCATGGTTGGGTCTTGTGGGAGATGCCTCTCTTGTAATTCCAACATAGAGCAATACTGCAATAACAGAATCTTCACCTACAATGGTATCTACAAAGACGGAAGACCAACTCAAGGAGGGTTCTGTTCTGCCATGATTGTTCATCAAAAGTTTGTTGTGAGGATTCCAGAAAAGCTTTCACCGGAGCAAGCTGCACCACTGCTGTGTGCTGGGGTGACGGCTTACAGTCCCTTAAGACAGTTCATGGGGTCCGGTAAGGTTCTCAATGCAGGAATTTTGGGTTTGGGGGGAGTTGGTCATCTGGGTGTTAAAATAGCGAAGGCAATGGGGCATCATGTGACTGTGATCAGCTCTTCTGATAAGAAAAGGGAGGAGGCTTTGCAGCACTTGGGAGCGGATGCTTTCCTAGTGAGCTCCAATGCGGCCGAGATGGAAGAAGCTGCAAACAATCTCGACTATATTCTTGACACCGTGCCGGCTTTGCACCCTTTGCAGTCTTATCTTTCACTTCTTAAAGTTGATGGGAAGCTATTCTTGGTTGGAGTATCTCCAAAACCACTGCAATTTGATGCAACCGATTTGATTCTAGGGAAGAAGAATATTACTGGAAGTTTCATTGGAAGCATGGAAGAGACTCAAGAAATATTAGACTTCTGGGCTGAGAAGAATTTGACTTCAATGATAGAGATAGTGAAGATGGACTACGTGAACAAGGCATTTGAAAGAATGGAAAGAAGCGATGTCAGGTATCGGTTTGTGGTGGATGTAGCTGGTAGCAACCTTGAATGA 1059 0.4608 MEGRRVVGWAARDASGLLSPYSFTLRKTGPEDVVIKVLYCGMDHTDLHQMRNEVHSTNYPLVPGHEVVGEVVELGSEVKKYRVGDMVGVGCMVGSCGRCLSCNSNIEQYCNNRIFTYNGIYKDGRPTQGGFCSAMIVHQKFVVRIPEKLSPEQAAPLLCAGVTAYSPLRQFMGSGKVLNAGILGLGGVGHLGVKIAKAMGHHVTVISSSDKKREEALQHLGADAFLVSSNAAEMEEAANNLDYILDTVPALHPLQSYLSLLKVDGKLFLVGVSPKPLQFDATDLILGKKNITGSFIGSMEETQEILDFWAEKNLTSMIEIVKMDYVNKAFERMERSDVRYRFVVDVAGSNLE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1184 352 FunFam Putative cinnamyl alcohol dehydrogenase 6 317 346 - -
Vvi7g1184 352 PANTHER ALDEHYDE REDUCTASE 5 348 IPR047109 GO:0016616
Vvi7g1184 352 SUPERFAMILY GroES-like 13 171 IPR011032 -
Vvi7g1184 352 Gene3D - 160 316 - -
Vvi7g1184 352 FunFam probable cinnamyl alcohol dehydrogenase 9 164 - -
Vvi7g1184 352 CDD CAD1 7 345 IPR047109 GO:0016616
Vvi7g1184 352 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Vvi7g1184 352 SMART PKS_ER_names_mod 16 344 IPR020843 GO:0016491
Vvi7g1184 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 314 IPR036291 -
Vvi7g1184 352 FunFam Cinnamyl alcohol dehydrogenase 160 316 - -
Vvi7g1184 352 Pfam Zinc-binding dehydrogenase 187 308 IPR013149 -
Vvi7g1184 352 Gene3D - 9 346 - -
Vvi7g1184 352 Pfam Alcohol dehydrogenase GroES-like domain 31 144 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1184 Vvi-Chr7 16177321 16178778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1184 4 351 Monolignol Biosynthesis Gene Families AT3G19450 65.517 1.69e-153 434