Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1180 ATGGAGAAGTTTCACGCACATGAAATCTTTGTTCAGCTGTTACATCTTCTCCTCCTGCTTCTCTTATCCCTTCAATGTATTTCTTCGGATTACACTCTTCCAAGTAAGTACTTCATCAACTGTGGGTCAAGCTCCACTATCAGCAATACCACGAGGACCTTCGTCGGGGACGAGAGTTCTGACTCCTTCACCTTATCTCCCAAGCAGGAGGCTGTTGAAGACAGCAGCCCTTCTCCGGCTACATCTCAACTCTATCGAACAGCGAGACTTTTCAGAAGCCCATCCTCATATGAGTTTGACATCGACCAAATCGGCATTTACTTGGTACGCCTCCATTTCTTCCCCTTTTCCTCCCCAACCGATCTCTTCACTGCTCTTTTCGATGTTTCGGTTTCTGGGTTACCCCTGTTGCTTCATAATTTCACTGTGCAAGACACCAGCAATCTTCCTCTCATAAAGGAATTCTTACTCACCATTAATATCAGCAAATTCATGGTGAAATTTGAACCGTCTCAACAGTCGTCCTTTGCATTTGTAAATGCTATAGAAGTCTTTATTGCTCCTGATAGCTTCATACCTGATTCTGCTCTACTAGTTACTCCAGCAGGAAGTAACAATAGTAGCTACAAGGGTATATCCTCTCGAGTTCTGCAAAAAGTTCACAGGATCAATGTTGGGGGCAGTGATATCGAACCCGATTCTGATACTCTATGGAGAAAATGGGTTCCAGATGACCCTTATCTTTTTAATAAGAGCGCTGCAAGAAATCGATCTGCCTCTACAGAGACTAGCTACCAGCGAATCTTGAGTGGTTATAACGACAGTACTCGTTATATTGCCCCACCTCTTGTTTATATGAGTGCCAAAGAAATGAATAAAAGTGACAGTGATCCGTTGCAATTTTTCAACATCAGTTGGGGTTTTGATGTGTCCAAGAATGCTAGGCACCTTCTTCGGGTTCACTTCTGCGACTTTATTAGCAACTCTGGGTCATTTAATCCATGGCTCAATCTCTATATTTATAGCTTCTTCAGTCGGAAAATAGACAATATCCCCTTGGGAGCTCCTTTTTTCCTTGATCTTTTAGTTGTTTCAGATGATTCTGGATTTCTCAATGTCAGTATAGGGCCTCAGATTGATTCTCCAGTTAACAATTCCTTCCTCAATGGCCTGGAGATTATGGAAATCATGGAGGAATTGGGTTGGGTTTCTATGGAAAATGAGTCTAAGAAGAAAACTACTCCTCTCCTAGTTGGTTTAGTTGTCGGAGGTTTGGCTCTCGTCTGCATTGTGATAGTTGTGCTCTTGTTGCGATCAAAATGCAGGAAGGAAAAGCCTGCTGAAGCTTCACACTGGTTGCCAGTTACTGTTGATGGGGGATTGAGTTCCCACAGCAGGGTATATGAGGCAACCATCCATGGCTCCCCTGTTCCTCATTTAAATCTGGGATTAAAAATACCTTTGGCTGAAATTCAATCTGCAACAAACAACTTCAGCAGCAAGTTGCTGGTTGGTAAGGGTGGATTTGGCAAAGTGTACCAAGGAACTCTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGACATGGCCAAGGCCTGCCTGAATTCCAGACTGAGATATTGGTGTTATCCAAAATTCGCCATCGCCACCTGGTTTCCCTGATTGGATATTGTGACGAAAGGAATGAAATGATTCTGGTTTATGAATTTATGCAGAATGGGACATTGAGAAATCATCTTTATGATTCAGATTTTCCGTGTTTGTCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTGCGGCAAGGGGACTTCACTACCTCCACACAGGTTCAGAAGGGGGAATCATTCACCGTGATGTTAAGTCCACAAACATCTTGCTTGATGAAAATTTTGTTGCTAAAGTTGCTGATTTCGGGCTTTCAAGATCAGGTCTTCTCCATCAAACCCATGTTAGCACAGCTGTAAAAGGCACCATTGGATATCTTGATCCAGAGTATTTCAGGACCCAAAAATTGACAGAAAAATCTGATGTTTACTCTTTTGGTGTGGTTCTTCTGGAGGTGCTATGTGCCAGACCAGCTATCAATCCCTTACTTCCAAGGGAGCAAGTGAACCTAGCTGAATGGGTGATGGTTAGGCAGAAGGAAGGATTTCTTGAACATGTTATTGATCCTTTGCTCGTGGGTAAAGTTAATCTCAATTCACTAAGAAAATTTGGTGAAACGGCAGAGAAATGTTTGCAGGAAGATGGCGCTGATAGGCCTACAATGGGGGATGTGGTGTGGGACTTGGAGTATGCTTTTCAGCTTCAACAAACTGCAATGCAGAGGGAGCCTTTAGATGACAGCACAAATGACGCTGCTTCCACGTTTCCATTGCCTAATGTTCAGCGTTATCCTTCATATAGCTTATCCATTGACGGCACTCATGTGCCCGCAAGGAGGAACGATGGTTCAGAGACAACAGAAAGCGAAGTTTTCTCCCAGTTGAGGATTGATGATGGCAGATAA 2520 0.4345 MEKFHAHEIFVQLLHLLLLLLLSLQCISSDYTLPSKYFINCGSSSTISNTTRTFVGDESSDSFTLSPKQEAVEDSSPSPATSQLYRTARLFRSPSSYEFDIDQIGIYLVRLHFFPFSSPTDLFTALFDVSVSGLPLLLHNFTVQDTSNLPLIKEFLLTINISKFMVKFEPSQQSSFAFVNAIEVFIAPDSFIPDSALLVTPAGSNNSSYKGISSRVLQKVHRINVGGSDIEPDSDTLWRKWVPDDPYLFNKSAARNRSASTETSYQRILSGYNDSTRYIAPPLVYMSAKEMNKSDSDPLQFFNISWGFDVSKNARHLLRVHFCDFISNSGSFNPWLNLYIYSFFSRKIDNIPLGAPFFLDLLVVSDDSGFLNVSIGPQIDSPVNNSFLNGLEIMEIMEELGWVSMENESKKKTTPLLVGLVVGGLALVCIVIVVLLLRSKCRKEKPAEASHWLPVTVDGGLSSHSRVYEATIHGSPVPHLNLGLKIPLAEIQSATNNFSSKLLVGKGGFGKVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVLSKIRHRHLVSLIGYCDERNEMILVYEFMQNGTLRNHLYDSDFPCLSWKQRLEICIGAARGLHYLHTGSEGGIIHRDVKSTNILLDENFVAKVADFGLSRSGLLHQTHVSTAVKGTIGYLDPEYFRTQKLTEKSDVYSFGVVLLEVLCARPAINPLLPREQVNLAEWVMVRQKEGFLEHVIDPLLVGKVNLNSLRKFGETAEKCLQEDGADRPTMGDVVWDLEYAFQLQQTAMQREPLDDSTNDAASTFPLPNVQRYPSYSLSIDGTHVPARRNDGSETTESEVFSQLRIDDGR* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1180 839 MobiDBLite consensus disorder prediction 816 839 - -
Vvi7g1180 839 Gene3D - 217 350 - -
Vvi7g1180 839 Gene3D - 35 187 - -
Vvi7g1180 839 Gene3D Transferase(Phosphotransferase) domain 1 574 792 - -
Vvi7g1180 839 CDD STKc_IRAK 504 768 - -
Vvi7g1180 839 Pfam Malectin-like domain 39 395 IPR024788 -
Vvi7g1180 839 FunFam Putative receptor-like protein kinase 36 188 - -
Vvi7g1180 839 FunFam Receptor-like protein kinase FERONIA 574 789 - -
Vvi7g1180 839 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1180 839 SUPERFAMILY Protein kinase-like (PK-like) 482 768 IPR011009 -
Vvi7g1180 839 MobiDBLite consensus disorder prediction 810 839 - -
Vvi7g1180 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Vvi7g1180 839 FunFam receptor-like protein kinase FERONIA 463 573 - -
Vvi7g1180 839 PANTHER OS07G0166700 PROTEIN 485 774 IPR045272 GO:0004714|GO:0006468
Vvi7g1180 839 SMART serkin_6 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1180 839 FunFam Putative receptor-like protein kinase 215 397 - -
Vvi7g1180 839 Pfam Protein tyrosine and serine/threonine kinase 504 764 IPR001245 GO:0004672|GO:0006468
Vvi7g1180 839 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Vvi7g1180 839 Gene3D Phosphorylase Kinase; domain 1 464 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1180 Vvi-Chr7 16125314 16127833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1180 1 839 Receptor kinase-like Gene Family AT2G23200 45.581 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi7g1180 Malectin_like 9.5e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1180 - - vvi:100252567 1629.38