LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi7g1179	ATGGACAAGTTTCAGAGCCATGGAGTCATTGTCCGCCTGCTACATCTTCTTCTCCCCCTCCAACTCTTATCCCTTCAATCTCTTTCTTTATCTTACACTCCTCCAAGTAAGTACTTCATCAACTGTGGGTCACAGAACAATACCAACCATACTGGCAGGACCTTCGTTGGGGACGTGAGTTCTGACTCCTCTTTCACCTTATCTCCGAAGCGGGACGACCCTGTTGTAGACAGCAGCCCTTCTCCGACTACATCTCAACTCTATCAAACAGCTAGGATTTTCAAAGGGTCGTCTTCATATGTGTTTCACATCGACCAAAATGGCACTTATTTGGTACGCCTCCATTTCTTCCCCTTTTCTTCCCCAACTGATCTCTCGACTGCTCTTTTCGATGTTTCGGTTTCTGGGCTACCCGGGTTGCTTCAGAATTTCTCTGTGCAAAACACCAGCAACCTTCCTCTGATAAAGGAATTCTTACTCACAATTAATATCAGCAAATTCACTGTGAAATTTGAACCTTCTCAAGAGTCGTCCTTCGCATTTGTAAATGCAATAGAAGTCTTCATTGCTCCTGATAGCTTTATCCCTGATTCTGCTCTACTAGTTACCCGAAAAGGAAGTAAAAGTAGTAGTTACAAGGGTCTGTTATCTCGGGTTCTCCAAAAAATTCACAGGGTCAATGTTGGGGGAAGTGAAATTGAACCCGGTTCAGATACTCTATGGAGAAACTGGGTTCCAGATGACACTTTTCTTTTCAATAGGAGCACTGCAAGAAATAAATCTTATGATCAGCCGATTGAGTACCAGGAAGGCCAGAGTGAATATAATAACAGCGATAGATATATTGCCCCGGAGAATGTTTATTTGACTGCCAAAGAAATGAATACAAATGAGGGAGACCAGTTGCAATCCTTCAACATCAGTTGGGGTTTTAATGTGACTAAGAATGCTACACACCTTCTTCGGGTTCACTTCTGCGACATCACTAGTGCCTCGCTATCACTAAGTCCATGGATCAATCTCTATATCAATAGCATCTTCAGTCGGAACATAAAGATTATCACCTTGGCAGCCCCTTTTTACCTTGATTTTGTAGTTGTTTCAGATAATTCCGGACTTCTTAATATCAGTATAGGGCCTCATAGGGATTCTCCAGTAAACAATTCCTTTCTCAATGGCCTGGAGATTATGGAAATCATGCAGGAATTGGGTTGGGTTTCAATCGAAAATGAATCTAAGAAGAAATATATTCCTCTCCTAGTTGGTTCAGTTGTTGGAGGTTTGGCTCTTGTCTGCCTTGTGGTAGTTGTGCTCTTGTTGCAATCAAAATGCAGGAAGGGAAAGCCTACTCAAGCTACGGATTGGTTGCCAATTACTGTTGATAGGGGACTGAGTTCCCACGGCAGGCTACATGAGGCAACCAATCATAGCTCCCCTGTTCCATATTTAAATCTGGGATTAAAGATACCTTTTGCGGAAGTTCGGTCAGCAACAAAAAACTTCAGCAGCAAGCTGCTGGTAGGCAAGGGTGGATTTGGCAAAGTCTACCAAGGAACTCTCAGGAATGGCATGAAAGTGGCAGTGAAGAGAAGTCAGCCAGGACATGGCCAAGGCCTGCCTGAATTCCAGACTGAGATATTGGTGTTATCCAAAATTCACCATCGCCATCTGGTTTCCCTGGTTGGGTATTGTGACGAAAGGAATGAAATGATTCTGGTTTATGAATTTATGCAGAAGGGCACTCTGAGAAGTCATCTTTATGATTCAGATTTGCCTTGTTTGTCTTGGAAGCAAAGGCTGGAAATTTGCATTGGTGCAGCAAGGGGACTTCACTACCTCCACACAGGTTCAGAAGGGGGAATCATTCACCGTGATATTAAGTCCACAAACATCTTGCTTGACGACAACTTTGTTGCTAAAGTTGCTGATTTTGGATTATCAAGATCAGGTCTTCCTCATCAAACCCATGTCAGCACAGCTGTAAAAGGCACCTTTGGATATCTTGATCCAGAGTACTTCAGGACCCAACAGTTGACAGACAAATCGGATGTTTACTCTTTTGGTGTGGTTCTTCTGGAAGTGCTATGTGCCAGACCAGTTATCAATCCCTCACTTCCAACGGAGCAAGTAAATCTAGCTGAATGGGTGATGGTTTGGCAGAAGAGAGGATTACTTGAACAGGTTATTGATCCTTTGCTCGTGGGTAAAGTCAATCTCAACTCACTAAGAAAATTTGGTGAAACGGCAGAGAAATGCTTGCAGGAAGAAGGAGCTGATAGGCCTACTATGGGTGATGTGGTGTGGGACTTGGAGTATGCTTTTCAGCTTCAACAAACTGCAATGCAGAGGGAGCCATTAGAGGACAGCACAAACGATGCTGCTTCCACATTTCCATTGCCTACCATTCAGCGTTATCCTTCATATAGCTTATCAATTTCAAACATCCATGGGCCCGAAAGGAGGGACAGCAGTTCAGAGACAACAGAAAGCGAAGTTTTCTCCCAGTTGAGGATTGCCCATGGCAGATAA	2529	0.4365	MDKFQSHGVIVRLLHLLLPLQLLSLQSLSLSYTPPSKYFINCGSQNNTNHTGRTFVGDVSSDSSFTLSPKRDDPVVDSSPSPTTSQLYQTARIFKGSSSYVFHIDQNGTYLVRLHFFPFSSPTDLSTALFDVSVSGLPGLLQNFSVQNTSNLPLIKEFLLTINISKFTVKFEPSQESSFAFVNAIEVFIAPDSFIPDSALLVTRKGSKSSSYKGLLSRVLQKIHRVNVGGSEIEPGSDTLWRNWVPDDTFLFNRSTARNKSYDQPIEYQEGQSEYNNSDRYIAPENVYLTAKEMNTNEGDQLQSFNISWGFNVTKNATHLLRVHFCDITSASLSLSPWINLYINSIFSRNIKIITLAAPFYLDFVVVSDNSGLLNISIGPHRDSPVNNSFLNGLEIMEIMQELGWVSIENESKKKYIPLLVGSVVGGLALVCLVVVVLLLQSKCRKGKPTQATDWLPITVDRGLSSHGRLHEATNHSSPVPYLNLGLKIPFAEVRSATKNFSSKLLVGKGGFGKVYQGTLRNGMKVAVKRSQPGHGQGLPEFQTEILVLSKIHHRHLVSLVGYCDERNEMILVYEFMQKGTLRSHLYDSDLPCLSWKQRLEICIGAARGLHYLHTGSEGGIIHRDIKSTNILLDDNFVAKVADFGLSRSGLPHQTHVSTAVKGTFGYLDPEYFRTQQLTDKSDVYSFGVVLLEVLCARPVINPSLPTEQVNLAEWVMVWQKRGLLEQVIDPLLVGKVNLNSLRKFGETAEKCLQEEGADRPTMGDVVWDLEYAFQLQQTAMQREPLEDSTNDAASTFPLPTIQRYPSYSLSISNIHGPERRDSSSETTESEVFSQLRIAHGR*	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi7g1179	842	SUPERFAMILY	Protein kinase-like (PK-like)	475	771	IPR011009	-
	Vvi7g1179	842	CDD	STKc_IRAK	507	771	-	-
	Vvi7g1179	842	ProSitePatterns	Protein kinases ATP-binding region signature.	507	529	IPR017441	GO:0005524
	Vvi7g1179	842	Pfam	Protein tyrosine and serine/threonine kinase	507	767	IPR001245	GO:0004672\|GO:0006468
	Vvi7g1179	842	FunFam	receptor-like protein kinase FERONIA	466	576	-	-
	Vvi7g1179	842	Pfam	Malectin-like domain	40	398	IPR024788	-
	Vvi7g1179	842	FunFam	Putative receptor-like protein kinase	218	400	-	-
	Vvi7g1179	842	PANTHER	OS07G0166700 PROTEIN	488	777	IPR045272	GO:0004714\|GO:0006468
	Vvi7g1179	842	Gene3D	Phosphorylase Kinase; domain 1	465	576	-	-
	Vvi7g1179	842	SMART	serkin_6	501	773	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi7g1179	842	FunFam	Receptor-like protein kinase FERONIA	577	791	-	-
	Vvi7g1179	842	Gene3D	-	36	190	-	-
	Vvi7g1179	842	Gene3D	-	221	400	-	-
	Vvi7g1179	842	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	621	633	IPR008271	GO:0004672\|GO:0006468
	Vvi7g1179	842	MobiDBLite	consensus disorder prediction	813	834	-	-
	Vvi7g1179	842	Gene3D	Transferase(Phosphotransferase) domain 1	577	795	-	-
	Vvi7g1179	842	FunFam	Putative receptor-like protein kinase	37	191	-	-
	Vvi7g1179	842	ProSiteProfiles	Protein kinase domain profile.	501	775	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi7g1179	Vvi-Chr7	16116975	16119503	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi7g1179	4	842	Receptor kinase-like Gene Family	AT2G23200	46.495	0.0	686

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vvi7g1179		Malectin_like	2e-29	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi7g1179	-		-	vvi:100242323	1590.86