Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi7g1178 ATGGAGAAGCTTCACCACTACAGCTTTCTTTTTCCCCTGCTCCTCATCCACTTCTCTTCTCATCTGCTCCTCGCATCAGATTACACTCTGCCTGATGAGTACTTCATCAGCTGTGGTTCAAGCTCTAACACCATCGTCAATGGCCGGAACTTTGTTGGAGATGTGAACCCCGGCTCCGCCTCCTCCTTCTCCGTCGGAATAAGCCGTACGGTAAAGGATGACAGCCCATCAACAGCTGCATCTCCCCTCTACCGAACTGCTAGGATTTTCAGACATCAATCTTCCTATGAGTTCCGGACCACCGAGAACGGCACATACGTGGTGCGCTTTCATTTCTACCCTTTTTCAGATCTTTCCGATGCTCTCTTCAGAGTTTCGGCTTCTGGGTTTTTACTGCTGTCGGATTTCAGCGTGGGAAACAGTAGTAACTCTCCTGTGATAAAGGAATTCGCAGTTCCAGTGGAGGTGGGAAAATTCAAAATCGACTTCACACCTCAAGGATCATCTTTTGGTTTTGTAAATGCCATAGAAGCCTTCCATGCCCCTGAAAATTTCATTTCAGATGGAATTTATTATGTTACTCCTGCAGGACATGGCGATCCTTACAAAGGTTTGGAATCTCATGCTTTACATACAATCCATAGGATCAACGTTGGAGGTGTCACTATCACTCCTGAGAATGATACACTCTGGAGAAGTTGGATACCAGATGATGCTTATCTATATTTCCCAGATTCTGCGAAAAACAGTACGTTCTACAGTGATAGGCCTAAGTACCAAGAACAGGGAGCTACTCCTTATTCTGCCCCAGATTATGTCTACAAGACTGCCAAAGAAATGAATATAGATCAAAGCAGGGTATTAAATAATTTCAATGTGACATGGAATTTCAATGTGAACAAGAATTCTACCTACTTTGTCAGGGCCCATTTTTGTGATATAATTAGTCCGTCCCTTGGTCTTCTTACGTTCAATTTCTATATCTATAGCCAGTTCAGTGATAAGATCAATCCATACGACATAATGGGCCAGTTGGCAGCTCCCTTTTACGTCGATTATGTTGTTGATTCTGACGATTCTGGATATATGAATATCAGTATTGGTCCTAGCCAGGGATCATCGAACGGAACTGCCTTTCTGAATGGGCTGGAGATTATGGAGTTGACCAAAGGATCCAGTTTAGTCCCTGTAGCAAACAAGCCGAAGAAGACACTCACGTTTGTTGTAGTTAGTTCAGTTGTTGGAGGAGTGGCTTCTGTCTTGGTTCTGTTGGGTGTGATCTTATGGGGTTGGAAATGCAGGAAAGCAAAGCATGTTGAAATCGTGGATTGGACTGTTCCTTATTATGGAAGGGGATCTTTCAGCAGGACAACTGATAAAACCGTTGATGTCTCCTCTGTTTCTGGTCTGAACCTGGGGCTAAAAATACCCTTTTCTGAAATTCTCCATGCGACCAATAACTTCGACGCAAAATTGATGATTGGTGAGGGTGGGTTCGGGAAAGTTTACCAAGGAACTCTTCGGAATGGTACGAAGGTGGCTATCAAACGAAGTGAGCCAGGAAATGGGCAGGGCTTCTCAGAATTCCAAACTGAAATCATAATCTTATCCAGAATTCGCCACCGCCATCTGGTTTCCCTGATTGGTTATTGTGACGAAAGGTTTGAGATGATACTGGTTTATGAATTCATGGAAAAGGGGACCCTAAGAGATCATCTATATGGTTCAAACGGGGACACCCAGAAATCGACTTCCCTCTCTGAGCTTTCCTGGAACCAAAGGCTTGAAATTTGCATAGGTTCAGCACGGGGCCTTGATTACCTTCATACTGGTTCAGACGGGGGAATCATTCACCGCGATGTCAAGTCGACAAACATCTTGCTTGATGAGTATTATGTTGCCAAAGTTGCTGATTTCGGTCTCTCGAAGTCAGGTCTTCCTGATCAGTCTCATTGCACCACTGATGTAAAAGGTAGCTTCGGTTACCTTGATCCAGAATACTTCAGATGCTTGCAGTTAACAGAAAAATCCGATATATATTCCTTTGGAGTCGTTCTCCTGGAAGTGCTTTGTGCTAGACCGGCCCTCGACAACTCGCTTCCCAGGGAGGAAATGAACTTAGCTGAATGGGGGATGTCATGGAAAAACAAAGGACAGCTGGAAAAAATTGTTGATCCTTTTCTTGCGGGTAAAATCAATCCAAGCTCATTGCGGAAATTTGGTGAAGTAGTTGAGAAGTGTTTGAGAGAGACTGGTGCTGATAGGCCTTCTATGCGCGATGTTTTGTGGGACTTAGAATATTCACTTCAGCTCCAACAGGTTATAATGCAGAGAGAAAAGTACTATGACAGCGTAACAGATGCTTCACTGGAGTTGCCACTGCCAGCTGTTCAGCGTCTGCCTTCTAATAGCTTGCCATTTGTGGAAGATGATCGGTCAGAACCAAATGCAAGTGAAGTATTCTCCCAATTGAGGATGGGTGGTGGCAGATAA 2493 0.4428 MEKLHHYSFLFPLLLIHFSSHLLLASDYTLPDEYFISCGSSSNTIVNGRNFVGDVNPGSASSFSVGISRTVKDDSPSTAASPLYRTARIFRHQSSYEFRTTENGTYVVRFHFYPFSDLSDALFRVSASGFLLLSDFSVGNSSNSPVIKEFAVPVEVGKFKIDFTPQGSSFGFVNAIEAFHAPENFISDGIYYVTPAGHGDPYKGLESHALHTIHRINVGGVTITPENDTLWRSWIPDDAYLYFPDSAKNSTFYSDRPKYQEQGATPYSAPDYVYKTAKEMNIDQSRVLNNFNVTWNFNVNKNSTYFVRAHFCDIISPSLGLLTFNFYIYSQFSDKINPYDIMGQLAAPFYVDYVVDSDDSGYMNISIGPSQGSSNGTAFLNGLEIMELTKGSSLVPVANKPKKTLTFVVVSSVVGGVASVLVLLGVILWGWKCRKAKHVEIVDWTVPYYGRGSFSRTTDKTVDVSSVSGLNLGLKIPFSEILHATNNFDAKLMIGEGGFGKVYQGTLRNGTKVAIKRSEPGNGQGFSEFQTEIIILSRIRHRHLVSLIGYCDERFEMILVYEFMEKGTLRDHLYGSNGDTQKSTSLSELSWNQRLEICIGSARGLDYLHTGSDGGIIHRDVKSTNILLDEYYVAKVADFGLSKSGLPDQSHCTTDVKGSFGYLDPEYFRCLQLTEKSDIYSFGVVLLEVLCARPALDNSLPREEMNLAEWGMSWKNKGQLEKIVDPFLAGKINPSSLRKFGEVVEKCLRETGADRPSMRDVLWDLEYSLQLQQVIMQREKYYDSVTDASLELPLPAVQRLPSNSLPFVEDDRSEPNASEVFSQLRMGGGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi7g1178 830 Gene3D Phosphorylase Kinase; domain 1 452 563 - -
Vvi7g1178 830 Gene3D - 209 390 - -
Vvi7g1178 830 Gene3D - 33 181 - -
Vvi7g1178 830 SUPERFAMILY Protein kinase-like (PK-like) 473 766 IPR011009 -
Vvi7g1178 830 FunFam Putative receptor-like protein kinase 33 182 - -
Vvi7g1178 830 FunFam Receptor-like protein kinase FERONIA 564 787 - -
Vvi7g1178 830 FunFam receptor-like protein kinase FERONIA 452 563 - -
Vvi7g1178 830 Pfam Malectin-like domain 36 387 IPR024788 -
Vvi7g1178 830 SMART serkin_6 488 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1178 830 FunFam Putative receptor-like protein kinase 208 389 - -
Vvi7g1178 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Vvi7g1178 830 ProSiteProfiles Protein kinase domain profile. 488 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi7g1178 830 Pfam Protein tyrosine and serine/threonine kinase 493 762 IPR001245 GO:0004672|GO:0006468
Vvi7g1178 830 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Vvi7g1178 830 Gene3D Transferase(Phosphotransferase) domain 1 564 788 - -
Vvi7g1178 830 PANTHER OS07G0166700 PROTEIN 475 772 IPR045272 GO:0004714|GO:0006468
Vvi7g1178 830 CDD STKc_IRAK 494 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi7g1178 Vvi-Chr7 16109278 16111770 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi7g1178 25 830 Receptor kinase-like Gene Family AT2G23200 46.770 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi7g1178 Malectin_like 1.7e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi7g1178 - - vvi:100264612 1611.28